RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 POTECB2RU33 542 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 KRT18P05783 430 aaKnown RBP20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 GLI1P08151 1106 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 ENOX2Q16206 610 aaKnown RBP20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 MEI1Q5TIA1 1274 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 POTEBQ6S5H4 581 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 SCFD1Q8WVM8 642 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 ZIM3Q96PE6 472 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 FAM107BQ9H098 131 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 KCTD10Q9H3F6 313 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 SERPINB13Q9UIV8 391 aa20.9■□□□□ 0.94
TNFRSF8-202ENST00000413146 A0A087X0T9 212 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 NPHP3-ACAD11A0A0J9YXS1 232 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 USP17L10C9JJH3 530 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 ANKRD65E5RJM6 399 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 EIF3HO15372 352 aaKnown RBP eCLIP20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 FAM228BP0C875 321 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 GUCY2DQ02846 1103 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 SF3B2Q13435 895 aaKnown RBP20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 ADAM9Q13443 819 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 TTMPQ5BVD1 217 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 PPP4R3CPQ6ZMV5 832 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 TBC1D16Q8TBP0 767 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 EPB41L5Q9HCM4 733 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 AIPL1Q9NZN9 384 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 SWAP70Q9UH65 585 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 ADAMTS1Q9UHI8 967 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 NFU1Q9UMS0 254 aa20.89■□□□□ 0.94
TNFRSF8-202ENST00000413146 C10orf71Q711Q0 1435 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 CCT5P48643 541 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 CARSP49589 748 aaKnown RBP20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 CRY2Q49AN0 593 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 PPM1EQ8WY54 764 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 IFT81Q8WYA0 676 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 ARL8AQ96BM9 186 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 UIMC1Q96RL1 719 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 ZHX3Q9H4I2 956 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 POLLQ9UGP5 575 aa20.89■□□□□ 0.93
TNFRSF8-202ENST00000413146 SHTN1A0MZ66 631 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 C6orf229H3BNL8 230 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 CETN3O15182 167 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 CYP11B2P19099 503 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 GTF2IP78347 998 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 EDRF1Q3B7T1 1238 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 KCTD1Q719H9 257 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 BCAS4Q8TDM0 211 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 KRT12Q99456 494 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 GANQ9H2C0 597 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 KIF13BQ9NQT8 1826 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 GRIN2DO15399 1336 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 LY75O60449 1722 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 SLC26A4O43511 780 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 CFAP58Q5T655 872 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 FAM196AQ6ZSG2 479 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 EFCAB13Q8IY85 973 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 CCDC43Q96MW1 224 aaKnown RBP20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 PACSIN2Q9UNF0 486 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 ATF5Q9Y2D1 282 aaPredicted RBP20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 MYO3BQ8WXR4 1341 aa20.88■□□□□ 0.93
TNFRSF8-202ENST00000413146 ESYT3A0FGR9 886 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 EBAG9O00559 213 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 MPHOSPH10O00566 681 aaKnown RBP20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 KCNH2Q12809 1159 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 ZC3H3Q8IXZ2 948 aaKnown RBP20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 TAF4BQ92750 862 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 INPP4AQ96PE3 977 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 PACSIN1Q9BY11 444 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 GLT8D2Q9H1C3 349 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 DDX4Q9NQI0 724 aaKnown RBP20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 ZSCAN5CA6NGD5 496 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 A6NNZ2 444 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 CLSTN1O94985 981 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 NR2F2P24468 414 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 SKOR1P84550 965 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 TUBB8Q3ZCM7 444 aa20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 TTC31Q49AM3 519 aaPredicted RBP20.87■□□□□ 0.93
TNFRSF8-202ENST00000413146 PITPNM2Q9BZ72 1349 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 F8W031 263 aaPredicted RBP20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 BBOX1O75936 387 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 TNNC1P63316 161 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 EHD4Q9H223 541 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 HDAC9Q9UKV0 1011 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 AFF2P51816 1311 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 VGLL3A8MV65 326 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L15C9J2P7 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L13C9JLJ4 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L11C9JVI0 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L18D6R9N7 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L22D6RA61 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L17D6RBQ6 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L19D6RCP7 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L20D6RJB6 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 FAM153BP0C7A2 387 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 SHMT1P34896 483 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L24Q0WX57 530 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 FAM153CQ494X1 144 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 USP17L6PQ6QN14 398 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 KCNMB3Q9NPA1 279 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 FAM153AQ9UHL3 310 aa20.86■□□□□ 0.93
TNFRSF8-202ENST00000413146 FRMD3A2A2Y4 597 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms