RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 BLZF1Q9H2G9 400 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 TUFT1Q9NNX1 390 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 CREBZFQ9NS37 354 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 ANO10Q9NW15 660 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 CPA4Q9UI42 421 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 MAN1B1Q9UKM7 699 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 KIAA1024Q9UPX6 916 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 IVNS1ABPQ9Y6Y0 642 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 NFASCO94856 1347 aa7.45□□□□□ -1.22
VPS41-204ENST00000413141 KIAA1217Q5T5P2 1943 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 B4DLN1 442 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 SPATA31C2B4DYI2 1134 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 E9PMD0 336 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 STRNO43815 780 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 TLR2O60603 784 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 CCNE2O96020 404 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 RPN1P04843 607 aaKnown RBP7.44□□□□□ -1.22
VPS41-204ENST00000413141 BMP6P22004 513 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 MUTP22033 750 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 UBA1P22314 1058 aaKnown RBP7.44□□□□□ -1.22
VPS41-204ENST00000413141 TM4SF4P48230 202 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 JAK3P52333 1124 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 NOGQ13253 232 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 GRM1Q13255 1194 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 CRHR2Q13324 411 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 MCM6Q14566 821 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 EPHA7Q15375 998 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 ZNF792Q3KQV3 632 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 ZNF746Q6NUN9 644 aaPredicted RBP7.44□□□□□ -1.22
VPS41-204ENST00000413141 C17orf99Q6UX52 265 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 SV2BQ7L1I2 683 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 MIER3Q7Z3K6 550 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 PLEKHH3Q7Z736 793 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 KCTD17Q8N5Z5 321 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 DYDC2Q96IM9 177 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 GSDMAQ96QA5 445 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 ZIC5Q96T25 663 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 C7orf25Q9BPX7 421 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 SENP7Q9BQF6 1050 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 LXNQ9BS40 222 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 TRIM9Q9C026 710 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 ZFYVE28Q9HCC9 887 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 JPH1Q9HDC5 661 aaPredicted RBP7.44□□□□□ -1.22
VPS41-204ENST00000413141 RGL1Q9NZL6 768 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 TCEAL9Q9UHQ7 104 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 LOXHD1Q8IVV2 1947 aa7.44□□□□□ -1.22
VPS41-204ENST00000413141 DOCK5Q9H7D0 1870 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 MYMKA6NI61 221 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 SLC15A5A6NIM6 579 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 ASB14A6NK59 587 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 WDR64B1ANS9 1081 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 CA12O43570 354 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 KLRC4O43908 158 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 COBLO75128 1261 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 SLITRK3O94933 977 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 EYA4O95677 639 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 PLA2G4BP0C869 781 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 SFNP31947 248 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 ZNF165P49910 485 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 APLP1P51693 650 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 SLC12A3P55017 1021 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 PSMC6P62333 389 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 AMPD3Q01432 767 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 CTTNQ14247 550 aaKnown RBP7.43□□□□□ -1.22
VPS41-204ENST00000413141 DHX8Q14562 1220 aaKnown RBP7.43□□□□□ -1.22
VPS41-204ENST00000413141 KCNB1Q14721 858 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 ISM2Q6H9L7 571 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 CNNM4Q6P4Q7 775 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 SEPT14Q6ZU15 432 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 ARMCX2Q7L311 632 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 ZNF467Q7Z7K2 595 aaPredicted RBP7.43□□□□□ -1.22
VPS41-204ENST00000413141 LUZP1Q86V48 1076 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 FBXO16Q8IX29 292 aaPredicted RBP7.43□□□□□ -1.22
VPS41-204ENST00000413141 SMAP1Q8IYB5 467 aaPredicted RBP7.43□□□□□ -1.22
VPS41-204ENST00000413141 BANK1Q8NDB2 785 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 RDM1Q8NG50 284 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 CAPNS2Q96L46 248 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 BPIFA3Q9BQP9 254 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 LRRC27Q9C0I9 530 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 NAT10Q9H0A0 1025 aaKnown RBP7.43□□□□□ -1.22
VPS41-204ENST00000413141 CBX8Q9HC52 389 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 RMND1Q9NWS8 449 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 WRAP73Q9P2S5 460 aaPredicted RBP7.43□□□□□ -1.22
VPS41-204ENST00000413141 SLC9A2Q9UBY0 812 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 SAMM50Q9Y512 469 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 ZSWIM8A7E2V4 1837 aa7.43□□□□□ -1.22
VPS41-204ENST00000413141 ZNFX1Q9P2E3 1918 aaKnown RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 AOC2O75106 756 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 FARP2O94887 1054 aaPredicted RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 RHOBTB3O94955 611 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 LYPLA2O95372 231 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 ARIH2O95376 493 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 ALDH1A1P00352 501 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 SSBP05455 408 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS41-204ENST00000413141 P4HBP07237 508 aaKnown RBP7.42□□□□□ -1.22
VPS41-204ENST00000413141 XRCC6P12956 609 aaKnown RBP eCLIP7.42□□□□□ -1.22
VPS41-204ENST00000413141 CYP11B2P19099 503 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 ACTR2P61160 394 aa7.42□□□□□ -1.22
VPS41-204ENST00000413141 ASIC1P78348 528 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms