RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 ARHGEF35A5YM69 484 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 TISP43B9A030 160 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 GCNT3O95395 438 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 GTF2A2P52657 109 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 LDLRAD1Q5T700 205 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 OTOP1Q7RTM1 612 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 CXCL11O14625 94 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 RGS20O76081 388 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 NT5C2P49902 561 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 MDM2Q00987 491 aaPredicted RBP10.83□□□□□ -0.68
SMPD4-203ENST00000412570 STXBP2Q15833 593 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 RGMBQ6NW40 437 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 SFR1Q86XK3 245 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 SLFN12Q8IYM2 578 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 REPS2Q8NFH8 660 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 RAD54LQ92698 747 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 MS4A4AQ96JQ5 239 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 SRRTQ9BXP5 876 aaKnown RBP10.83□□□□□ -0.68
SMPD4-203ENST00000412570 GLT8D2Q9H1C3 349 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 MRPL44Q9H9J2 332 aaKnown RBP10.83□□□□□ -0.68
SMPD4-203ENST00000412570 KCNMB3Q9NPA1 279 aa10.83□□□□□ -0.68
SMPD4-203ENST00000412570 SYNRGQ9UMZ2 1314 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 TBCAO75347 108 aaKnown RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 SLITRK3O94933 977 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 ARIH2O95376 493 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 GJB1P08034 283 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 SPATA31C1P0DKV0 1188 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 GCFC2P16383 781 aaKnown RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 ADCYAP1R1P41586 468 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 CASP5P51878 434 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 NOL9Q5SY16 702 aaKnown RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 TCERG1LQ5VWI1 586 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 PCIF1Q9H4Z3 704 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 PSME4Q14997 1843 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 HSD17B4P51659 736 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 UBASH3AP57075 661 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 TMEM62Q0P6H9 643 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 METTL13Q8N6R0 699 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 REEP2Q9BRK0 252 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 CRACR2AQ9BSW2 395 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 CNMDO75829 334 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 FAM13AO94988 1023 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 TXNP10599 105 aaKnown RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 ALDH5A1P51649 535 aaPredicted RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 IQCB1Q15051 598 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 HSDL1Q3SXM5 330 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 HAUS3Q68CZ6 603 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 TMEM143Q96AN5 459 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 CEP170P1Q96L14 293 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 MED15Q96RN5 788 aa10.82□□□□□ -0.68
SMPD4-203ENST00000412570 AGO4Q9HCK5 861 aaKnown RBP10.82□□□□□ -0.68
SMPD4-203ENST00000412570 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 ZNF286BP0CG31 522 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 MYL5Q02045 173 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 TRAF1Q13077 416 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 CEP135Q66GS9 1140 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 FAM177A1Q8N128 213 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 CCDC155Q8N6L0 562 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 MYBP10242 640 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 TPM4P67936 248 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 CRHR2Q13324 411 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 TMEM132AQ24JP5 1023 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 KANK3Q6NY19 840 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 LRRC71Q8N4P6 559 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 CCDC47Q96A33 483 aaKnown RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 VAV3Q9UKW4 847 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 COL2A1P02458 1487 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 TNPO2O14787 897 aaKnown RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 MATR3P43243 847 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 FANCCQ00597 558 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 TBC1D8BQ0IIM8 1120 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 MOGSQ13724 837 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 DNTTIP2Q5QJE6 756 aaKnown RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 VSIG10LQ86VR7 867 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 CCDC60Q8IWA6 550 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 PROCA1Q8NCQ7 364 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 JPH1Q9HDC5 661 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 RNF19AQ9NV58 838 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 TRMT1Q9NXH9 659 aaKnown RBP10.81□□□□□ -0.68
SMPD4-203ENST00000412570 TRPC6Q9Y210 931 aa10.81□□□□□ -0.68
SMPD4-203ENST00000412570 LAD1O00515 517 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 TEX33O43247 280 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 PSMD10O75832 226 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 FXR2P51116 673 aaKnown RBP eCLIP10.8□□□□□ -0.68
SMPD4-203ENST00000412570 CYP2J2P51589 502 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 SEMA3FQ13275 785 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 ODR4Q5SWX8 454 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 SYCP3Q8IZU3 236 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 CSGALNACT2Q8N6G5 542 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 CCSER1Q9C0I3 900 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 DOCK3Q8IZD9 2030 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 GOLGA8IPA6NC78 632 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 GOLGA8JA6NMD2 632 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 PEX3P56589 373 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 AMPD3Q01432 767 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 APBA1Q02410 837 aa10.8□□□□□ -0.68
SMPD4-203ENST00000412570 SPIRE1Q08AE8 756 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms