RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 H3BRB1 525 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 MSH4O15457 936 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 DHX15O43143 795 aaKnown RBP9.3□□□□□ -0.92
RPE-204ENST00000411934 EDIL3O43854 480 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 ATP9AO75110 1047 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 CLTBP09497 229 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 ARP10275 920 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 TCF7P36402 384 aaPredicted RBP9.3□□□□□ -0.92
RPE-204ENST00000411934 JAK3P52333 1124 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 ITGB3BPQ13352 177 aaPredicted RBP9.3□□□□□ -0.92
RPE-204ENST00000411934 GNL2Q13823 731 aaKnown RBP9.3□□□□□ -0.92
RPE-204ENST00000411934 MFSD10Q14728 455 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 LETM2Q2VYF4 491 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 TRIM60Q495X7 471 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 PRPF38BQ5VTL8 546 aaKnown RBP9.3□□□□□ -0.92
RPE-204ENST00000411934 PLPPR4Q7Z2D5 763 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 CYP2W1Q8TAV3 490 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 ETNPPLQ8TBG4 499 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 AFAP1L1Q8TED9 768 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 DPF3Q92784 378 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 KAT2BQ92831 832 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 FERMT2Q96AC1 680 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 VTI1AQ96AJ9 217 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 C16orf70Q9BSU1 422 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 TEKT3Q9BXF9 490 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 SMARCAD1Q9H4L7 1026 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 TUT1Q9H6E5 874 aaKnown RBP9.3□□□□□ -0.92
RPE-204ENST00000411934 AZI2Q9H6S1 392 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 GJB4Q9NTQ9 266 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 ERAP1Q9NZ08 941 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 PRKAG2Q9UGJ0 569 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 NOL7Q9UMY1 257 aaKnown RBP9.3□□□□□ -0.92
RPE-204ENST00000411934 DOCK5Q9H7D0 1870 aa9.3□□□□□ -0.92
RPE-204ENST00000411934 LTBP2Q14767 1821 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 WDR64B1ANS9 1081 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 H3BQV1 296 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 LAD1O00515 517 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 KIAA0355O15063 1070 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 CCNT1O60563 726 aaKnown RBP9.29□□□□□ -0.92
RPE-204ENST00000411934 GAS7O60861 476 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 CAND2O75155 1236 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 PSMD10O75832 226 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 BAG4O95429 457 aaKnown RBP9.29□□□□□ -0.92
RPE-204ENST00000411934 TDP2O95551 362 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 CD4P01730 458 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 GNAT1P11488 350 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 PSEN2P49810 448 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 ATN1P54259 1190 aaPredicted RBP9.29□□□□□ -0.92
RPE-204ENST00000411934 ACTR2P61160 394 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 IRX5P78411 483 aaPredicted RBP9.29□□□□□ -0.92
RPE-204ENST00000411934 RBL2Q08999 1139 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 PPP2R5CQ13362 524 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 KIAA0753Q2KHM9 967 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 NBPF20Q3BBV1 942 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 RILPL1Q5EBL4 403 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 LRCH2Q5VUJ6 765 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 FAM160B1Q5W0V3 765 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 LARP1BQ659C4 914 aaKnown RBP9.29□□□□□ -0.92
RPE-204ENST00000411934 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 B3GNT9Q6UX72 402 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 BRAPQ7Z569 592 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 CCDC155Q8N6L0 562 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 ZNF579Q8NAF0 562 aaKnown RBP9.29□□□□□ -0.92
RPE-204ENST00000411934 CAGE1Q8TC20 777 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 PDLIM7Q9NR12 457 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 GTF2IRD1Q9UHL9 959 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 TBX21Q9UL17 535 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 ATP11BQ9Y2G3 1177 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 PCDHA10Q9Y5I2 948 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 GRIN2DO15399 1336 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 NRCAMQ92823 1304 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 IGSF9BQ9UPX0 1349 aa9.29□□□□□ -0.92
RPE-204ENST00000411934 TNRC18O15417 2968 aaPredicted RBP9.28□□□□□ -0.92
RPE-204ENST00000411934 COL1A2P08123 1366 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 A0A1W2PPC1 479 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 GSTTP1A0A1W2PQM5 241 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 NEMFO60524 1076 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 DKC1O60832 514 aaKnown RBP eCLIP9.28□□□□□ -0.92
RPE-204ENST00000411934 PARNO95453 639 aaKnown RBP9.28□□□□□ -0.92
RPE-204ENST00000411934 PSAPP07602 524 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 ZNF286BP0CG31 522 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 PTGS1P23219 599 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 TLE2Q04725 743 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 FAAP100Q0VG06 881 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 EARS2Q5JPH6 523 aaKnown RBP9.28□□□□□ -0.92
RPE-204ENST00000411934 ABHD15Q6UXT9 468 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 FAM43BQ6ZT52 329 aaPredicted RBP9.28□□□□□ -0.92
RPE-204ENST00000411934 C7orf61Q8IZ16 206 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 C7orf31Q8N865 590 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 NEK9Q8TD19 979 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 ZFP91Q96JP5 570 aaPredicted RBP9.28□□□□□ -0.92
RPE-204ENST00000411934 FAM167AQ96KS9 214 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 PPME1Q9Y570 386 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 TANC1Q9C0D5 1861 aa9.28□□□□□ -0.92
RPE-204ENST00000411934 C17orf102A2RUQ5 167 aa9.27□□□□□ -0.93
RPE-204ENST00000411934 RRN3P2A6NIE6 340 aa9.27□□□□□ -0.93
RPE-204ENST00000411934 SLC37A4O43826 429 aa9.27□□□□□ -0.93
RPE-204ENST00000411934 B4GALT4O60513 344 aa9.27□□□□□ -0.93
RPE-204ENST00000411934 PQBP1O60828 265 aaKnown RBP9.27□□□□□ -0.93
RPE-204ENST00000411934 BMP15O95972 392 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms