RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 EPN3Q9H201 632 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 BHMT2Q9H2M3 363 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 C6orf50Q9HD87 102 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 C20orf96Q9NUD7 363 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 ASIC3Q9UHC3 531 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 SNCGO76070 127 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 IDEP14735 1019 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 C1orf189Q5VU69 101 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 CCDC103Q8IW40 242 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 STAMBPL1Q96FJ0 436 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 PLEKHA8Q96JA3 519 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 AVENQ9NQS1 362 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 MCUBQ9NWR8 336 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 PPARGC1AQ9UBK2 798 aaKnown RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 SETD5Q9C0A6 1442 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 STAT5AP42229 794 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 MAGEA9P43362 315 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 QARSP47897 775 aaKnown RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 STAT5BP51692 787 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 IL9RQ01113 521 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 APBA1Q02410 837 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 ADALQ6DHV7 355 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 ZNF556Q9HAH1 456 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 MRPL39Q9NYK5 338 aaKnown RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 AXIN2Q9Y2T1 843 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 V9GYQ6 96 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 PSDA5PKW4 1024 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 M0QZ92 97 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 CSPG5O95196 566 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 TALDO1P37837 337 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 IL12RB1P42701 662 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 NOLC1Q14978 699 aaKnown RBP eCLIP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 TRPM8Q7Z2W7 1104 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 AIDAQ96BJ3 306 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 USE1Q9NZ43 259 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 ARPP21Q9UBL0 812 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 POTEMA6NI47 508 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 PRODHO43272 600 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 PDHA1P08559 390 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 CES1P23141 567 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 GPC3P51654 580 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 COX10Q12887 443 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 TUBA3CQ13748 450 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 POTEHQ6S545 545 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 POTEGQ6S5H5 508 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 LRRC70Q7Z2Q7 622 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 RHPN2Q8IUC4 686 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 SNIP1Q8TAD8 396 aaKnown RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 USP28Q96RU2 1077 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 ST7Q9NRC1 585 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 TRMT1Q9NXH9 659 aaKnown RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 ADAM21Q9UKJ8 722 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 BRD4O60885 1362 aaPredicted RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 MAP3K15Q6ZN16 1313 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 A0A0X1KG70 313 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 F8W810 466 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 HLA-DOAP06340 250 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 PIK3R1P27986 724 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 S100A2P29034 98 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 DNAJA1P31689 397 aaKnown RBP4.92□□□□□ -1.62
PTPN13-202ENST00000411767 BIRC3Q13489 604 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 TRIM16LQ309B1 348 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 RINT1Q6NUQ1 792 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 TPTE2Q6XPS3 522 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 NLRP14Q86W24 1093 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 ERO1AQ96HE7 468 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 C8orf76Q96K31 380 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 TBATAQ96M53 351 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 OSBPL8Q9BZF1 889 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 OSBPL6Q9BZF3 934 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 UBXN6Q9BZV1 441 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 DKK3Q9UBP4 350 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 SNX6Q9UNH7 406 aa4.92□□□□□ -1.62
PTPN13-202ENST00000411767 CALUO43852 315 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ARID5BQ14865 1188 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 USF2Q15853 346 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 OCLNQ16625 522 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CENPUQ71F23 418 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 NBPF5PQ86XG9 351 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 STKLD1Q8NE28 680 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 WDR48Q8TAF3 677 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 EXOC4Q96A65 974 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ADNPQ9H2P0 1102 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CD209Q9NNX6 404 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 NOD1Q9Y239 953 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CES2O00748 559 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ULK1O75385 1050 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 TAC1P20366 129 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 KPNA1P52294 538 aaPredicted RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 LGALS3BPQ08380 585 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CBLBQ13191 982 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 RTN1Q16799 776 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 C4orf50Q6ZRC1 276 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 KIRREL3Q8IZU9 778 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ENKURQ8TC29 256 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 FNBP1Q96RU3 617 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 UBN1Q9NPG3 1134 aa4.91□□□□□ -1.62
PTPN13-202ENST00000411767 ADD3Q9UEY8 706 aaKnown RBP4.91□□□□□ -1.62
PTPN13-202ENST00000411767 CFAP99D6REC4 459 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms