RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 SETD4Q9NVD3 440 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 ERAP1Q9NZ08 941 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 MTCH2Q9Y6C9 303 aa16.89■□□□□ 0.29
CBX3-203ENST00000409747 GOLGA8AA7E2F4 631 aa16.88■□□□□ 0.29
CBX3-203ENST00000409747 GOLGA8BA8MQT2 603 aa16.88■□□□□ 0.29
CBX3-203ENST00000409747 FOSP01100 380 aaPredicted RBP16.88■□□□□ 0.29
CBX3-203ENST00000409747 FGD1P98174 961 aa16.88■□□□□ 0.29
CBX3-203ENST00000409747 DBF4BQ8NFT6 615 aa16.88■□□□□ 0.29
CBX3-203ENST00000409747 LMBR1Q8WVP7 490 aa16.88■□□□□ 0.29
CBX3-203ENST00000409747 SEPT8Q92599 483 aa16.88■□□□□ 0.29
CBX3-203ENST00000409747 RIC8AQ9NPQ8 531 aa16.88■□□□□ 0.29
CBX3-203ENST00000409747 MICAL3Q7RTP6 2002 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 ATP9AO75110 1047 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 ADCY7P51828 1080 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 AAK1Q2M2I8 961 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 TCTN1Q2MV58 587 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 ADCK5Q3MIX3 580 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 TAF2Q6P1X5 1199 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 APBB2Q92870 758 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 TCEANC2Q96MN5 208 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 BRPF3Q9ULD4 1205 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 COL4A4P53420 1690 aaPredicted RBP16.87■□□□□ 0.29
CBX3-203ENST00000409747 KLF18A0A0U1RQI7 1052 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 LCHNA4D1U4 455 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 RFXAPO00287 272 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 ARHGEF15O94989 841 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 CTSHP09668 335 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 ADAM17P78536 824 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 SKIV2LQ15477 1246 aaKnown RBP16.87■□□□□ 0.29
CBX3-203ENST00000409747 TMCO2Q7Z6W1 182 aaPredicted RBP16.87■□□□□ 0.29
CBX3-203ENST00000409747 GLG1Q92896 1179 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 TGS1Q96RS0 853 aaKnown RBP16.87■□□□□ 0.29
CBX3-203ENST00000409747 SMARCAD1Q9H4L7 1026 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 JPH1Q9HDC5 661 aaPredicted RBP16.87■□□□□ 0.29
CBX3-203ENST00000409747 INSL6Q9Y581 213 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 XIRP2A4UGR9 3374 aa16.87■□□□□ 0.29
CBX3-203ENST00000409747 KAT6AQ92794 2004 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 CCDC196A0A1B0GTZ2 297 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 EPOPA6NHQ4 379 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 RPLP2P05387 115 aaKnown RBP16.86■□□□□ 0.29
CBX3-203ENST00000409747 FUT2Q10981 343 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 PPFIA1Q13136 1202 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 AP3B2Q13367 1082 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 MKRN4PQ13434 485 aaPredicted RBP16.86■□□□□ 0.29
CBX3-203ENST00000409747 RPAINQ86UA6 219 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 RSPH3Q86UC2 560 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 MYOCDQ8IZQ8 938 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 TNPO1Q92973 898 aaKnown RBP16.86■□□□□ 0.29
CBX3-203ENST00000409747 MXRA8Q9BRK3 442 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 SDF4Q9BRK5 362 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 BARHL2Q9NY43 387 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 LMCD1Q9NZU5 365 aa16.86■□□□□ 0.29
CBX3-203ENST00000409747 V9GY48 417 aaPredicted RBP16.86■□□□□ 0.29
CBX3-203ENST00000409747 GRB10Q13322 594 aa16.85■□□□□ 0.29
CBX3-203ENST00000409747 FAM26DQ5JW98 314 aa16.85■□□□□ 0.29
CBX3-203ENST00000409747 PKD2L1Q9P0L9 805 aa16.85■□□□□ 0.29
CBX3-203ENST00000409747 NAP1L2Q9ULW6 460 aaPredicted RBP16.85■□□□□ 0.29
CBX3-203ENST00000409747 TELO2Q9Y4R8 837 aa16.85■□□□□ 0.29
CBX3-203ENST00000409747 SIP14410 1827 aa16.85■□□□□ 0.29
CBX3-203ENST00000409747 GSTTP1A0A1W2PQM5 241 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 LINC01553A4QN01 128 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 STXBP3O00186 592 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 METAP2P50579 478 aaKnown RBP eCLIP16.84■□□□□ 0.29
CBX3-203ENST00000409747 ERVK-21P61565 698 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 FAM117BQ6P1L5 589 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■□□□□ 8.7
CBX3-203ENST00000409747 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 ANO3Q9BYT9 981 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 AZI2Q9H6S1 392 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 KCNH7Q9NS40 1196 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 SLC9A2Q9UBY0 812 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 TUBE1Q9UJT0 475 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 COG5Q9UP83 839 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 NFASCO94856 1347 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 SMCO2A6NFE2 343 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 TNFRSF10AO00220 468 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 MARK3P27448 753 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 HTRA4P83105 476 aaPredicted RBP16.84■□□□□ 0.29
CBX3-203ENST00000409747 GRIK4Q16099 956 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 CEP55Q53EZ4 464 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 TYW1BQ6NUM6 668 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 KCNB2Q92953 911 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 IFIH1Q9BYX4 1025 aaKnown RBP16.84■□□□□ 0.29
CBX3-203ENST00000409747 MUC3AQ02505 3323 aa16.84■□□□□ 0.29
CBX3-203ENST00000409747 COL4A6Q14031 1691 aa16.83■□□□□ 0.29
CBX3-203ENST00000409747 RRN3P2A6NIE6 340 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 REC8O95072 547 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 SREBF1P36956 1147 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 MCTP2Q6DN12 878 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 BLOC1S2Q6QNY1 142 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 ADAMTS19Q8TE59 1207 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 GDPD5Q8WTR4 605 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 CCDC12Q8WUD4 166 aaPredicted RBP16.83■□□□□ 0.28
CBX3-203ENST00000409747 JAKMIP1Q96N16 626 aaKnown RBP16.83■□□□□ 0.28
CBX3-203ENST00000409747 SAMD11Q96NU1 681 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 MTUS1Q9ULD2 1270 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 TTC28Q96AY4 2481 aa16.83■□□□□ 0.28
CBX3-203ENST00000409747 PRRC2BQ5JSZ5 2229 aaKnown RBP16.82■□□□□ 0.28
CBX3-203ENST00000409747 MBLAC1A4D2B0 266 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms