RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 FECHP22830 423 aa22.96■■□□□ 1.27
USP39-203ENST00000409470 SYCP1Q15431 976 aa22.96■■□□□ 1.27
USP39-203ENST00000409470 LRRC55Q6ZSA7 311 aa22.96■■□□□ 1.27
USP39-203ENST00000409470 TRAF5O00463 557 aa22.95■■□□□ 1.26
USP39-203ENST00000409470 SLITRK3O94933 977 aa22.95■■□□□ 1.26
USP39-203ENST00000409470 FDX1P10109 184 aa22.95■■□□□ 1.26
USP39-203ENST00000409470 FKBP3Q00688 224 aaKnown RBP22.95■■□□□ 1.26
USP39-203ENST00000409470 VWA3BQ502W6 1294 aa22.95■■□□□ 1.26
USP39-203ENST00000409470 NUP58Q9BVL2 599 aa22.95■■□□□ 1.26
USP39-203ENST00000409470 UNC45AQ9H3U1 944 aa22.95■■□□□ 1.26
USP39-203ENST00000409470 PPP2R3BQ9Y5P8 575 aa22.95■■□□□ 1.26
USP39-203ENST00000409470 ITGB5P18084 799 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 TRIM21P19474 475 aaKnown RBP22.94■■□□□ 1.26
USP39-203ENST00000409470 GHRHRQ02643 423 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 MAN2A1Q16706 1144 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 TSR1Q2NL82 804 aaKnown RBP22.94■■□□□ 1.26
USP39-203ENST00000409470 ZCWPW2Q504Y3 356 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 CYP26C1Q6V0L0 522 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 OR8K1Q8NGG5 319 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 SYTL5Q8TDW5 730 aaPredicted RBP22.94■■□□□ 1.26
USP39-203ENST00000409470 PIGOQ8TEQ8 1089 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 SCFD1Q8WVM8 642 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 TSC1Q92574 1164 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 ATG4CQ96DT6 458 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 MAP3K20Q9NYL2 800 aaKnown RBP22.94■■□□□ 1.26
USP39-203ENST00000409470 DNAI1Q9UI46 699 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 CAPN11Q9UMQ6 739 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 UTRNP46939 3433 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 VWA5AO00534 786 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 NKRFO15226 690 aaKnown RBP eCLIP22.94■■□□□ 1.26
USP39-203ENST00000409470 HIRAP54198 1017 aaPredicted RBP22.94■■□□□ 1.26
USP39-203ENST00000409470 HMGCS2P54868 508 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 IL31RAQ8NI17 732 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 TRERF1Q96PN7 1200 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 RUSC1Q9BVN2 902 aa22.94■■□□□ 1.26
USP39-203ENST00000409470 TBCAO75347 108 aaKnown RBP22.93■■□□□ 1.26
USP39-203ENST00000409470 ERVK-24P63145 666 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 TRIM65Q6PJ69 517 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 SFR1Q86XK3 245 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 SAMD3Q8N6K7 520 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 RETREG2Q8NC44 543 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 KLRG1Q96E93 195 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 ERGIC2Q96RQ1 377 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 RIT2Q99578 217 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 NDST4Q9H3R1 872 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 PKD2L1Q9P0L9 805 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 ADGRG1Q9Y653 693 aa22.93■■□□□ 1.26
USP39-203ENST00000409470 DDX39AO00148 427 aaKnown RBP22.92■■□□□ 1.26
USP39-203ENST00000409470 BCRP11274 1271 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 KLK7P49862 253 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 RPS6P62753 249 aaKnown RBP22.92■■□□□ 1.26
USP39-203ENST00000409470 EPHA7Q15375 998 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 SUPT20HL1Q3ZLR7 823 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 SPON1Q9HCB6 807 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 KCNH7Q9NS40 1196 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 PHLPP2Q6ZVD8 1323 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 CCDC40Q4G0X9 1142 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 PCNX4Q63HM2 1172 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 NIPA1Q7RTP0 329 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 COL4A3BPQ9Y5P4 624 aa22.92■■□□□ 1.26
USP39-203ENST00000409470 C19orf81C9J6K1 198 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 CTIFO43310 598 aaKnown RBP22.91■■□□□ 1.26
USP39-203ENST00000409470 EIF2AK2P19525 551 aaKnown RBP22.91■■□□□ 1.26
USP39-203ENST00000409470 MUTP22033 750 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 RINT1Q6NUQ1 792 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 NSMFQ6X4W1 530 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 RNF207Q6ZRF8 634 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 WNK4Q96J92 1243 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 CEP63Q96MT8 703 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 NACC1Q96RE7 527 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 TAAR1Q96RJ0 339 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 DNAJC7Q99615 494 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 KCTD10Q9H3F6 313 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 DICER1Q9UPY3 1922 aaKnown RBP22.91■■□□□ 1.26
USP39-203ENST00000409470 RSPH10B2B2RC85 870 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 RSPH10BP0C881 870 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 ERCC3P19447 782 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 RBM10P98175 930 aaKnown RBP22.91■■□□□ 1.26
USP39-203ENST00000409470 PRKG1Q13976 671 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 TKFCQ3LXA3 575 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 C12orf42Q96LP6 360 aa22.91■■□□□ 1.26
USP39-203ENST00000409470 MRPL44Q9H9J2 332 aaKnown RBP22.91■■□□□ 1.26
USP39-203ENST00000409470 CASP5P51878 434 aa22.9■■□□□ 1.26
USP39-203ENST00000409470 PPP4R3CPQ6ZMV5 832 aa22.9■■□□□ 1.26
USP39-203ENST00000409470 TTYH3Q9C0H2 523 aa22.9■■□□□ 1.26
USP39-203ENST00000409470 RNF146Q9NTX7 359 aa22.9■■□□□ 1.26
USP39-203ENST00000409470 TMOD4Q9NZQ9 345 aa22.9■■□□□ 1.26
USP39-203ENST00000409470 UBIAD1Q9Y5Z9 338 aa22.9■■□□□ 1.26
USP39-203ENST00000409470 RASSF10A6NK89 507 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 GNA14O95837 355 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 GNG11P61952 73 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 MRPS9P82933 396 aaKnown RBP22.89■■□□□ 1.26
USP39-203ENST00000409470 B3GNT9Q6UX72 402 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 RMDN3Q96TC7 470 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 POLD4Q9HCU8 107 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 JADE2Q9NQC1 790 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 AGPAT5Q9NUQ2 364 aa22.89■■□□□ 1.26
USP39-203ENST00000409470 ZBTB39O15060 712 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 FAM13AO94988 1023 aa22.89■■□□□ 1.25
USP39-203ENST00000409470 MYCLP12524 364 aaPredicted RBP22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms