RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 K7ELQ4 463 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 CCNE2O96020 404 aa22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 FAM47CQ5HY64 1035 aa22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 SH3RF1Q7Z6J0 888 aa22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 SLC5A5Q92911 643 aa22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 RIT2Q99578 217 aa22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 TRPV6Q9H1D0 765 aa22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 PRDM5Q9NQX1 630 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 TMEM39AQ9NV64 488 aa22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 ZNF215Q9UL58 517 aaPredicted RBP22.48■■□□□ 1.19
PDLIM2-207ENST00000409417 TRIM43BA6NCK2 446 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 DDX39AO00148 427 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 KIAA0355O15063 1070 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 B4GALT4O60513 344 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 CCNT1O60563 726 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 UTP14CQ5TAP6 766 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 TRIM50Q86XT4 487 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 C7orf31Q8N865 590 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 TRIM43Q96BQ3 446 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 TRMT13Q9NUP7 481 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 TBX21Q9UL17 535 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 SLC37A4O43826 429 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 ATG7O95352 703 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 SUPT20HL2P0C7V6 817 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 KRT76Q01546 638 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 ZNF746Q6NUN9 644 aaPredicted RBP22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 ETNPPLQ8TBG4 499 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 PPP1R13LQ8WUF5 828 aa22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 INTS4Q96HW7 963 aaKnown RBP22.47■■□□□ 1.19
PDLIM2-207ENST00000409417 EMSYQ7Z589 1322 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 GAS7O60861 476 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 LGR5O75473 907 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 U2AF2P26368 475 aaKnown RBP eCLIP22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 GNL2Q13823 731 aaKnown RBP22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 NOSTRINQ8IVI9 506 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 GLG1Q92896 1179 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 SMARCAD1Q9H4L7 1026 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 AZI2Q9H6S1 392 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 HDAC6Q9UBN7 1215 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 GTF2IRD1Q9UHL9 959 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 TCEAL9Q9UHQ7 104 aa22.46■■□□□ 1.19
PDLIM2-207ENST00000409417 RANBP2P49792 3224 aaKnown RBP22.45■■□□□ 1.18
PDLIM2-207ENST00000409417 LRCH2Q5VUJ6 765 aa22.45■■□□□ 1.18
PDLIM2-207ENST00000409417 ABHD15Q6UXT9 468 aa22.45■■□□□ 1.18
PDLIM2-207ENST00000409417 SMAP1Q8IYB5 467 aaPredicted RBP22.45■■□□□ 1.18
PDLIM2-207ENST00000409417 PCYT2Q99447 389 aa22.45■■□□□ 1.18
PDLIM2-207ENST00000409417 KCNMB3Q9NPA1 279 aa22.45■■□□□ 1.18
PDLIM2-207ENST00000409417 ERAP1Q9NZ08 941 aa22.45■■□□□ 1.18
PDLIM2-207ENST00000409417 PSMD10O75832 226 aa22.44■■□□□ 1.18
PDLIM2-207ENST00000409417 LARP1BQ659C4 914 aaKnown RBP22.44■■□□□ 1.18
PDLIM2-207ENST00000409417 MIS18BP1Q6P0N0 1132 aa22.44■■□□□ 1.18
PDLIM2-207ENST00000409417 PLPPR4Q7Z2D5 763 aa22.44■■□□□ 1.18
PDLIM2-207ENST00000409417 GJA10Q969M2 543 aa22.44■■□□□ 1.18
PDLIM2-207ENST00000409417 FAM20AQ96MK3 541 aa22.44■■□□□ 1.18
PDLIM2-207ENST00000409417 TEKT3Q9BXF9 490 aa22.44■■□□□ 1.18
PDLIM2-207ENST00000409417 IGKV6D-21A0A0A0MT36 114 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 KIF28PB7ZC32 967 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 H3BQV1 296 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 TBX3O15119 743 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 SMIM10L2AP0DMW4 78 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 SMIM10L2BP0DMW5 78 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 RAG1P15918 1043 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 MAGEA10P43363 369 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 PTGISQ16647 500 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 GDF6Q6KF10 455 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 HSCBQ8IWL3 235 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 LBHD1Q9BQE6 289 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 RNPEPQ9H4A4 650 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 NOD1Q9Y239 953 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 PCDHA10Q9Y5I2 948 aa22.43■■□□□ 1.18
PDLIM2-207ENST00000409417 TIMP1P01033 207 aa22.42■■□□□ 1.18
PDLIM2-207ENST00000409417 ITGB8P26012 769 aa22.42■■□□□ 1.18
PDLIM2-207ENST00000409417 STAT5BP51692 787 aa22.42■■□□□ 1.18
PDLIM2-207ENST00000409417 CTAGE1Q96RT6 745 aa22.42■■□□□ 1.18
PDLIM2-207ENST00000409417 WDR64B1ANS9 1081 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 BACH1O14867 736 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 PDCP20941 246 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 HOXC8P31273 242 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 SFNP31947 248 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 TRAPPC10P48553 1259 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 SLC26A2P50443 739 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 POTEDQ86YR6 584 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 AFAP1L1Q8TED9 768 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 HAS1Q92839 578 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 GDF15Q99988 308 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 NOC4LQ9BVI4 516 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 HIPK3Q9H422 1215 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 DISC1Q9NRI5 854 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 PCDH10Q9P2E7 1040 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 C17orf102A2RUQ5 167 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 WNT7AO00755 349 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 PSAPP07602 524 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 CYP2C9P11712 490 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 ATP2B1P20020 1258 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 MARK3P27448 753 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 JAK3P52333 1124 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 FAM160B1Q5W0V3 765 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 MCTP1Q6DN14 999 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 SWSAP1Q6NVH7 229 aa22.41■■□□□ 1.18
PDLIM2-207ENST00000409417 B3GNT9Q6UX72 402 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms