RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 PHLPP2Q6ZVD8 1323 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 IKBKBO14920 756 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 LRRC8AQ8IWT6 810 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 GRAMD1CQ8IYS0 662 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 PPARDQ03181 441 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 BRD3Q15059 726 aa27.17■■□□□ 1.94
SPIRE1-202ENST00000409402 YWHAGP61981 247 aaKnown RBP eCLIP27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 CCNYQ8ND76 341 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 BHMT2Q9H2M3 363 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 ZNF521Q96K83 1311 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 CD58P19256 250 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 CCNE1P24864 410 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 GPATCH11Q8N954 259 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 GPT2Q8TD30 523 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 FTOQ9C0B1 505 aaKnown RBP eCLIP27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 ECE1P42892 770 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 ZNF449Q6P9G9 518 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 THAP9Q9H5L6 903 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 PPP4R3CPQ6ZMV5 832 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 VCX3BQ9H321 246 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 RCOR1Q9UKL0 485 aa27.16■■□□□ 1.94
SPIRE1-202ENST00000409402 KCNQ2O43526 872 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 GDAP1L1Q96MZ0 367 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 TBC1D22BQ9NU19 505 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 NECTIN1Q15223 517 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 PEX3P56589 373 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 NXNQ6DKJ4 435 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 PPP1R18Q6NYC8 613 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 VCXQ9H320 206 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 NUF2Q9BZD4 464 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 SLC8A2Q9UPR5 921 aa27.15■■□□□ 1.94
SPIRE1-202ENST00000409402 NAA35Q5VZE5 725 aa27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 RNF146Q9NTX7 359 aa27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 BCAP29Q9UHQ4 241 aa27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 TSTA3Q13630 321 aaPredicted RBP27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 NFIXQ14938 502 aa27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 GFPT2O94808 682 aa27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 KRT1P04264 644 aa27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 PRELPP51888 382 aa27.14■■□□□ 1.94
SPIRE1-202ENST00000409402 MCPH1Q8NEM0 835 aa27.14■■□□□ 1.93
SPIRE1-202ENST00000409402 CERKQ8TCT0 537 aa27.14■■□□□ 1.93
SPIRE1-202ENST00000409402 ISCA1Q9BUE6 129 aa27.14■■□□□ 1.93
SPIRE1-202ENST00000409402 WDR64B1ANS9 1081 aa27.14■■□□□ 1.93
SPIRE1-202ENST00000409402 HEXIM1O94992 359 aaKnown RBP27.14■■□□□ 1.93
SPIRE1-202ENST00000409402 RAB3IPQ96QF0 476 aaPredicted RBP27.14■■□□□ 1.93
SPIRE1-202ENST00000409402 ALKQ9UM73 1620 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 TNFAIP2Q03169 654 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 MCF2LO15068 1137 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 SPP2Q13103 211 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 TTLL4Q14679 1199 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 SCARA5Q6ZMJ2 495 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 MYRIPQ8NFW9 859 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 PAGE5Q96GU1 130 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 DCP1AQ9NPI6 582 aaPredicted RBP27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 TULP4Q9NRJ4 1543 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 ACTN1P12814 892 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 OTUD5Q96G74 571 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 SPON1Q9HCB6 807 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 FAM196BA6NMK8 535 aa27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 TTC31Q49AM3 519 aaPredicted RBP27.13■■□□□ 1.93
SPIRE1-202ENST00000409402 FAM133AQ8N9E0 248 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 MMP19Q99542 508 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 GOLGA8IPA6NC78 632 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 GOLGA8JA6NMD2 632 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 PHKA2P46019 1235 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 LRRC63Q05C16 580 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 DPCR1Q3MIW9 517 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 TTC1Q99614 292 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 NEDD4P46934 1319 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 KRT76Q01546 638 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 RBL2Q08999 1139 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 SIRT2Q8IXJ6 389 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 THEM5Q8N1Q8 247 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 MAGOHBQ96A72 148 aaKnown RBP27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 PTPN22Q9Y2R2 807 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 PFKFB3Q16875 520 aaPredicted RBP27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 TBC1D10CQ8IV04 446 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 TOPORSQ9NS56 1045 aaPredicted RBP27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 COPB2P35606 906 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 SATB1Q01826 763 aa27.12■■□□□ 1.93
SPIRE1-202ENST00000409402 PRPSAP2O60256 369 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 CUL4AQ13619 759 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 C10orf67Q8IYJ2 551 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 AIFM3Q96NN9 605 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 SNAP23O00161 211 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 MFSD14CQ5VZR4 134 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 EFCAB13Q8IY85 973 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 KCTD6Q8NC69 237 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 RABEP2Q9H5N1 569 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 CDC25BP30305 580 aa27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 ETF1P62495 437 aaKnown RBP27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 TDRD7Q8NHU6 1098 aaKnown RBP27.11■■□□□ 1.93
SPIRE1-202ENST00000409402 IQGAP3Q86VI3 1631 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 OR6B3Q8NGW1 331 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 CEP95Q96GE4 821 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 SPATA31A6Q5VVP1 1343 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 PDE1BQ01064 536 aa27.1■■□□□ 1.93
SPIRE1-202ENST00000409402 ARL13BQ3SXY8 428 aa27.1■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms