RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 RASA3Q14644 834 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 HADHQ16836 314 aaKnown RBP19.09■□□□□ 0.65
SMPD4-202ENST00000409031 AGGF1Q8N302 714 aaeCLIP19.09■□□□□ 0.65
SMPD4-202ENST00000409031 ZBTB38Q8NAP3 1195 aaPredicted RBP19.09■□□□□ 0.65
SMPD4-202ENST00000409031 TRIM11Q96F44 468 aa19.09■□□□□ 0.65
SMPD4-202ENST00000409031 ARHGAP10A1A4S6 786 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 NSFP46459 744 aaKnown RBP19.08■□□□□ 0.65
SMPD4-202ENST00000409031 YWHAGP61981 247 aaKnown RBP eCLIP19.08■□□□□ 0.65
SMPD4-202ENST00000409031 KRT80Q6KB66 452 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 FAM186BQ8IYM0 893 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 TRIML2Q8N7C3 387 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 GABPB2Q8TAK5 448 aaPredicted RBP19.08■□□□□ 0.65
SMPD4-202ENST00000409031 KCND1Q9NSA2 647 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 GCNT4Q9P109 453 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 SOS2Q07890 1332 aaPredicted RBP19.08■□□□□ 0.65
SMPD4-202ENST00000409031 MYL7Q01449 175 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 CAV1Q03135 178 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 EPM2AIP1Q7L775 607 aaPredicted RBP19.08■□□□□ 0.65
SMPD4-202ENST00000409031 SRRM1Q8IYB3 904 aaKnown RBP19.08■□□□□ 0.65
SMPD4-202ENST00000409031 ELOA2Q8IYF1 753 aaPredicted RBP19.08■□□□□ 0.65
SMPD4-202ENST00000409031 EMILIN3Q9NT22 766 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 ZNF446Q9NWS9 450 aa19.08■□□□□ 0.65
SMPD4-202ENST00000409031 F8W031 263 aaPredicted RBP19.08■□□□□ 0.64
SMPD4-202ENST00000409031 MAPK4P31152 587 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 FAM83BQ5T0W9 1011 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 TPTE2Q6XPS3 522 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 TPH2Q8IWU9 490 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 PIP4K2CQ8TBX8 421 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 YEATS2Q9ULM3 1422 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 IPO5O00410 1097 aaKnown RBP19.08■□□□□ 0.64
SMPD4-202ENST00000409031 KRT26Q7Z3Y9 468 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 MTA3Q9BTC8 594 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 LCMT1Q9UIC8 334 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 PNPLA6Q8IY17 1366 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 SAMD9LQ8IVG5 1584 aa19.08■□□□□ 0.64
SMPD4-202ENST00000409031 DAPK3O43293 454 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 GYPCP04921 128 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 PDE6BP35913 854 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 CNPY4Q8N129 248 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 CCT6BQ92526 530 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 EFHD1Q9BUP0 239 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 PACSIN2Q9UNF0 486 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-202ENST00000409031 SASH3O75995 380 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 SLC1A4P43007 532 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
SMPD4-202ENST00000409031 BPIFB4P59827 614 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 AOC3Q16853 763 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 UNC13DQ70J99 1090 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 GFM2Q969S9 779 aaKnown RBP19.07■□□□□ 0.64
SMPD4-202ENST00000409031 CCDC97Q96F63 343 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-202ENST00000409031 A0A0G2JND7 137 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 STMN1P16949 149 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 HSPA9P38646 679 aaKnown RBP19.07■□□□□ 0.64
SMPD4-202ENST00000409031 MAEAQ7L5Y9 396 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 CALR3Q96L12 384 aaKnown RBP19.07■□□□□ 0.64
SMPD4-202ENST00000409031 UIMC1Q96RL1 719 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 EYA3Q99504 573 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 PSTPIP2Q9H939 334 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 FBXO2Q9UK22 296 aaPredicted RBP19.07■□□□□ 0.64
SMPD4-202ENST00000409031 LAMC1P11047 1609 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 ATP10DQ9P241 1426 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 CHRNA3P32297 505 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 AP2B1P63010 937 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 MORC4Q8TE76 937 aa19.07■□□□□ 0.64
SMPD4-202ENST00000409031 ADGRL3Q9HAR2 1447 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 MFAP3P55082 362 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 TEKT1Q969V4 418 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 C1orf112Q9NSG2 853 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 PLEKHG1Q9ULL1 1385 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 GOLGA8QA0A0J9YX86 632 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 GOLGA8OA6NCC3 632 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 GOLGA8NF8WBI6 632 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 BACH1O14867 736 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 DKC1O60832 514 aaKnown RBP eCLIP19.06■□□□□ 0.64
SMPD4-202ENST00000409031 HNRNPCP07910 306 aaKnown RBP eCLIP19.06■□□□□ 0.64
SMPD4-202ENST00000409031 PABPN1LA6NDY0 278 aaKnown RBP19.06■□□□□ 0.64
SMPD4-202ENST00000409031 TRAPPC11Q7Z392 1133 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 SERPINI1Q99574 410 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 NDE1Q9NXR1 346 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 NOC2LQ9Y3T9 749 aaKnown RBP19.06■□□□□ 0.64
SMPD4-202ENST00000409031 PVALEFA0A1B0GWK0 134 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 WDR91A4D1P6 747 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 MX2P20592 715 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 ASPHQ12797 758 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 DHX34Q14147 1143 aaKnown RBP19.06■□□□□ 0.64
SMPD4-202ENST00000409031 ATG16L1Q676U5 607 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 SH2D4AQ9H788 454 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 ANKZF1Q9H8Y5 726 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 POLD4Q9HCU8 107 aa19.06■□□□□ 0.64
SMPD4-202ENST00000409031 CHN1P15882 459 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 SNX16P57768 344 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 TRIM65Q6PJ69 517 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 TRIM10Q9UDY6 481 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 KCNB1Q14721 858 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 KAZNQ674X7 775 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 STOX1Q6ZVD7 989 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 LRGUKQ96M69 825 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 ATP6V0A4Q9HBG4 840 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 UBN2Q6ZU65 1347 aa19.05■□□□□ 0.64
SMPD4-202ENST00000409031 SSU72P8A0A1W2PR75 194 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms