RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CIITAP33076 1130 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 CDK7P50613 346 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 ACTR2P61160 394 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 FAAP100Q0VG06 881 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 GNL2Q13823 731 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 SAFBQ15424 915 aaKnown RBP eCLIP11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 CHRDL2Q6WN34 429 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 ANKRD33Q7Z3H0 272 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 C16orf70Q9BSU1 422 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 TMEM39AQ9NV64 488 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 DDX25Q9UHL0 483 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 TCEAL9Q9UHQ7 104 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 SMC3Q9UQE7 1217 aa11.66□□□□□ -0.54
TSPAN9-202ENST00000407263 UMODL1Q5DID0 1318 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 GSTTP1A0A1W2PQM5 241 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 TRIM43BA6NCK2 446 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 K7ELQ4 463 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 WNT7AO00755 349 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 MSH4O15457 936 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 MAFGO15525 162 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 CCNT1O60563 726 aaKnown RBP11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 GAS7O60861 476 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 CCNE2O96020 404 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 CYP2C9P11712 490 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 ATP2B1P20020 1258 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 MAGEA10P43363 369 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 USP11P51784 963 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 LRCH2Q5VUJ6 765 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 GDF6Q6KF10 455 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 NFRKBQ6P4R8 1299 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 POTEDQ86YR6 584 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 C7orf31Q8N865 590 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 SLC43A3Q8NBI5 491 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 TRIM43Q96BQ3 446 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 HDAC6Q9UBN7 1215 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 TBX21Q9UL17 535 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 ZNF215Q9UL58 517 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 NOD1Q9Y239 953 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 KIF3AQ9Y496 699 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 MICAL3Q7RTP6 2002 aa11.65□□□□□ -0.54
TSPAN9-202ENST00000407263 EMSYQ7Z589 1322 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 H3BRB1 525 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 RBAK-RBAKDNI3L0D1 243 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 HAS3O00219 553 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 DHX15O43143 795 aaKnown RBP11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 PPFIA4O75335 1185 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 CD4P01730 458 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 SMIM10L2AP0DMW4 78 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 SMIM10L2BP0DMW5 78 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 RAG1P15918 1043 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 ITGB8P26012 769 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 Q4G0T1 1027 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 MCTP1Q6DN14 999 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 MOXD1Q6UVY6 613 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 TET1Q8NFU7 2136 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 FBXO18Q8NFZ0 1043 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 SEPT1Q8WYJ6 367 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 GLG1Q92896 1179 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 BADQ92934 168 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 TOX2Q96NM4 488 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 PCYT2Q99447 389 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 LBHD1Q9BQE6 289 aaPredicted RBP11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 TEKT3Q9BXF9 490 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 GTF2IRD1Q9UHL9 959 aa11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.64□□□□□ -0.55
TSPAN9-202ENST00000407263 H3BQV1 296 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 BACH1O14867 736 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 SUPT20HL2P0C7V6 817 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 GCFC2P16383 781 aaKnown RBP11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 CYP2C18P33260 490 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 ZNF200P98182 395 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 KRT76Q01546 638 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 HIC1Q14526 733 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 PTGISQ16647 500 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 CCDC60Q8IWA6 550 aaPredicted RBP11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 ETNPPLQ8TBG4 499 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 SLC5A5Q92911 643 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 MBOAT7Q96N66 472 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 UNC45AQ9H3U1 944 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 HIPK3Q9H422 1215 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 AZI2Q9H6S1 392 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 TBC1D22BQ9NU19 505 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 TRPC6Q9Y210 931 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 SAMM50Q9Y512 469 aa11.63□□□□□ -0.55
TSPAN9-202ENST00000407263 CYP3A7-CYP3A51PA0A087WV96 503 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 VPS37CA5D8V6 355 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 LGR5O75473 907 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 CYP3A7P24462 503 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 IGBP1P78318 339 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 PTPN11Q06124 597 aaPredicted RBP11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 PPFIA1Q13136 1202 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 CUL4AQ13619 759 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 NBR1Q14596 966 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 MIS18BP1Q6P0N0 1132 aa11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 TRMT1LQ7Z2T5 733 aaKnown RBP11.62□□□□□ -0.55
TSPAN9-202ENST00000407263 SESTD1Q86VW0 696 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms