RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-205	ENST00000405675	PANX2	Q96RD6	677 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	ZNF408	Q9H9D4	720 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	RNF225	M0QZC1	329 aa	Predicted RBP	32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	STX10	O60499	249 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	MFAP3L	O75121	409 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	PPAT	Q06203	517 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	CCDC65	Q8IXS2	484 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	SYTL5	Q8TDW5	730 aa	Predicted RBP	32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	HSD17B14	Q9BPX1	270 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	MXRA8	Q9BRK3	442 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	TUBGCP2	Q9BSJ2	902 aa		32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	CTDP1	Q9Y5B0	961 aa	Predicted RBP	32.21	■■■□□ 2.75
CSNK1E-205	ENST00000405675	ITGB5	P18084	799 aa		32.2	■■■□□ 2.75
CSNK1E-205	ENST00000405675	DSG3	P32926	999 aa		32.2	■■■□□ 2.75
CSNK1E-205	ENST00000405675	CTTN	Q14247	550 aa	Known RBP	32.2	■■■□□ 2.75
CSNK1E-205	ENST00000405675	COG2	Q14746	738 aa		32.2	■■■□□ 2.75
CSNK1E-205	ENST00000405675	ZNF577	Q9BSK1	485 aa		32.2	■■■□□ 2.75
CSNK1E-205	ENST00000405675	FRMD3	A2A2Y4	597 aa		32.2	■■■□□ 2.74
CSNK1E-205	ENST00000405675	GAS7	O60861	476 aa		32.2	■■■□□ 2.74
CSNK1E-205	ENST00000405675	KRT18	P05783	430 aa	Known RBP	32.2	■■■□□ 2.74
CSNK1E-205	ENST00000405675	MYOCD	Q8IZQ8	938 aa		32.2	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PARP14	Q460N5	1801 aa		32.19	■■■□□ 2.74
CSNK1E-205	ENST00000405675		B4DLN1	442 aa		32.19	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TPM2	P07951	284 aa		32.19	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TREML2	Q5T2D2	321 aa		32.19	■■■□□ 2.74
CSNK1E-205	ENST00000405675	DYDC2	Q96IM9	177 aa		32.19	■■■□□ 2.74
CSNK1E-205	ENST00000405675	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	32.19	■■■□□ 2.74	2e-6	■■□□□ 11.5
CSNK1E-205	ENST00000405675	SPDYE5	A6NIY4	337 aa		32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PRKCSH	P14314	528 aa	Predicted RBP	32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	HOXA7	P31268	230 aa	Predicted RBP	32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	SET	Q01105	290 aa	Predicted RBP	32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	GIT2	Q14161	759 aa		32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	HERC4	Q5GLZ8	1057 aa	Predicted RBP	32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	FAM114A1	Q8IWE2	563 aa		32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	UNC45A	Q9H3U1	944 aa		32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PES1	O00541	588 aa	Known RBP	32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	SLITRK3	O94933	977 aa		32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	MYRIP	Q8NFW9	859 aa		32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	RLF	Q13129	1914 aa		32.18	■■■□□ 2.74
CSNK1E-205	ENST00000405675	FDX1	P10109	184 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TRERF1	Q96PN7	1200 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TAAR1	Q96RJ0	339 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	BHMT2	Q9H2M3	363 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	ADAMTS5	Q9UNA0	930 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	RIPK3	Q9Y572	518 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	RBBP6	Q7Z6E9	1792 aa	Known RBP	32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	RPS6	P62753	249 aa	Known RBP	32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TOGARAM2	Q6ZUX3	1019 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	REPS2	Q8NFH8	660 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	REEP2	Q9BRK0	252 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	RUSC1	Q9BVN2	902 aa		32.17	■■■□□ 2.74
CSNK1E-205	ENST00000405675	EYA4	O95677	639 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	MTIF2	P46199	727 aa	Known RBP	32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	LRRC63	Q05C16	580 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	MIIP	Q5JXC2	388 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	LDLRAD1	Q5T700	205 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	B3GNT9	Q6UX72	402 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	LRRC55	Q6ZSA7	311 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TPH2	Q8IWU9	490 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	ZHX3	Q9H4I2	956 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TUFT1	Q9NNX1	390 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	RABGAP1	Q9Y3P9	1069 aa		32.16	■■■□□ 2.74
CSNK1E-205	ENST00000405675	IPO5	O00410	1097 aa	Known RBP	32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	MTF1	Q14872	753 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	ZCWPW2	Q504Y3	356 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	REXO1L1P	Q8IX06	675 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PIGO	Q8TEQ8	1089 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	ZNF592	Q92610	1267 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	OPTN	Q96CV9	577 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	WDR11	Q9BZH6	1224 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	NMRK2	Q9NPI5	230 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PKD2L1	Q9P0L9	805 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PTPRF	P10586	1907 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675		A0A1W2PQC6	194 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	SOWAHD	A6NJG2	315 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	RIOK3	O14730	519 aa	Known RBP	32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	MRPS9	P82933	396 aa	Known RBP	32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	GADL1	Q6ZQY3	521 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	CNGA4	Q8IV77	575 aa		32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	ZNF526	Q8TF50	670 aa	Predicted RBP	32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PURB	Q96QR8	312 aa	Known RBP	32.15	■■■□□ 2.74
CSNK1E-205	ENST00000405675		A0A0G2JLL6	359 aa	Predicted RBP	32.14	■■■□□ 2.74
CSNK1E-205	ENST00000405675	ZBTB39	O15060	712 aa		32.14	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PRRT2	Q7Z6L0	340 aa	Predicted RBP	32.14	■■■□□ 2.74
CSNK1E-205	ENST00000405675	SCFD1	Q8WVM8	642 aa		32.14	■■■□□ 2.74
CSNK1E-205	ENST00000405675	TEKT3	Q9BXF9	490 aa		32.14	■■■□□ 2.74
CSNK1E-205	ENST00000405675	KCNH7	Q9NS40	1196 aa		32.14	■■■□□ 2.74
CSNK1E-205	ENST00000405675	PPP2R2C	Q9Y2T4	447 aa		32.14	■■■□□ 2.74
CSNK1E-205	ENST00000405675	DNM2	P50570	870 aa		32.14	■■■□□ 2.73
CSNK1E-205	ENST00000405675	NOC4L	Q9BVI4	516 aa	Known RBP	32.14	■■■□□ 2.73
CSNK1E-205	ENST00000405675	BCAS3	Q9H6U6	928 aa		32.14	■■■□□ 2.73
CSNK1E-205	ENST00000405675	HOXC10	Q9NYD6	342 aa		32.14	■■■□□ 2.73
CSNK1E-205	ENST00000405675	WRAP73	Q9P2S5	460 aa	Predicted RBP	32.14	■■■□□ 2.73
CSNK1E-205	ENST00000405675	UBIAD1	Q9Y5Z9	338 aa		32.14	■■■□□ 2.73
CSNK1E-205	ENST00000405675	FRMPD4	Q14CM0	1322 aa		32.14	■■■□□ 2.73
CSNK1E-205	ENST00000405675	SPDYE16	A6NNV3	312 aa	Predicted RBP	32.13	■■■□□ 2.73
CSNK1E-205	ENST00000405675	CXCL11	O14625	94 aa		32.13	■■■□□ 2.73
CSNK1E-205	ENST00000405675	EIF2AK2	P19525	551 aa	Known RBP	32.13	■■■□□ 2.73
CSNK1E-205	ENST00000405675	PPIL2	Q13356	520 aa		32.13	■■■□□ 2.73
CSNK1E-205	ENST00000405675	PCNX4	Q63HM2	1172 aa		32.13	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms