RNA–Protein interactions for RNA: ENST00000404583.5

CDPF1-203, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CDPF1, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-203ENST00000404583 CCNT1O60563 726 aaKnown RBP16.53■□□□□ 0.24
CDPF1-203ENST00000404583 CLTBP09497 229 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 ACTR2P61160 394 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 KIAA0753Q2KHM9 967 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 TRIM50Q86XT4 487 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 KATNAL1Q9BW62 490 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 SEZ6LQ9BYH1 1024 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 TUT1Q9H6E5 874 aaKnown RBP16.53■□□□□ 0.24
CDPF1-203ENST00000404583 PDLIM7Q9NR12 457 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 TBC1D22BQ9NU19 505 aa16.53■□□□□ 0.24
CDPF1-203ENST00000404583 DDX25Q9UHL0 483 aaKnown RBP16.53■□□□□ 0.24
CDPF1-203ENST00000404583 KAT6AQ92794 2004 aa16.52■□□□□ 0.24
CDPF1-203ENST00000404583 TRIM43BA6NCK2 446 aa16.52■□□□□ 0.23
CDPF1-203ENST00000404583 TLR3O15455 904 aaKnown RBP16.52■□□□□ 0.23
CDPF1-203ENST00000404583 B4GALT4O60513 344 aa16.52■□□□□ 0.23
CDPF1-203ENST00000404583 CCNE2O96020 404 aa16.52■□□□□ 0.23
CDPF1-203ENST00000404583 CD4P01730 458 aa16.52■□□□□ 0.23
CDPF1-203ENST00000404583 PPP4R3AQ6IN85 833 aa16.52■□□□□ 0.23
CDPF1-203ENST00000404583 TRIM43Q96BQ3 446 aaPredicted RBP16.52■□□□□ 0.23
CDPF1-203ENST00000404583 FOXP1Q9H334 677 aaPredicted RBP16.52■□□□□ 0.23
CDPF1-203ENST00000404583 TMEM39AQ9NV64 488 aa16.52■□□□□ 0.23
CDPF1-203ENST00000404583 WDR81Q562E7 1941 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 LAMA3Q16787 3333 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 KIF28PB7ZC32 967 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 WNT7AO00755 349 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 GNL2Q13823 731 aaKnown RBP16.51■□□□□ 0.23
CDPF1-203ENST00000404583 ETNPPLQ8TBG4 499 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 SLC5A5Q92911 643 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 FOXD4L1Q9NU39 408 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 TRMT13Q9NUP7 481 aaKnown RBP16.51■□□□□ 0.23
CDPF1-203ENST00000404583 HDAC6Q9UBN7 1215 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 PRKAG2Q9UGJ0 569 aa16.51■□□□□ 0.23
CDPF1-203ENST00000404583 MYH9P35579 1960 aaKnown RBP16.5■□□□□ 0.23
CDPF1-203ENST00000404583 H3BQV1 296 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 GAS7O60861 476 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 ATG7O95352 703 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 GCFC2P16383 781 aaKnown RBP16.5■□□□□ 0.23
CDPF1-203ENST00000404583 ATP2B1P20020 1258 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 PTPN11Q06124 597 aaPredicted RBP16.5■□□□□ 0.23
CDPF1-203ENST00000404583 LRCH2Q5VUJ6 765 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 LARP1BQ659C4 914 aaKnown RBP16.5■□□□□ 0.23
CDPF1-203ENST00000404583 GDF6Q6KF10 455 aaPredicted RBP16.5■□□□□ 0.23
CDPF1-203ENST00000404583 ABHD15Q6UXT9 468 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 HSCBQ8IWL3 235 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 C7orf31Q8N865 590 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 PCYT2Q99447 389 aa16.5■□□□□ 0.23
CDPF1-203ENST00000404583 NAP1L4Q99733 375 aaKnown RBP16.5■□□□□ 0.23
CDPF1-203ENST00000404583 LGR5O75473 907 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 PSMD10O75832 226 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 ITGB8P26012 769 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 U2AF2P26368 475 aaKnown RBP eCLIP16.49■□□□□ 0.23
CDPF1-203ENST00000404583 MARK3P27448 753 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 MCTP1Q6DN14 999 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 ZNF746Q6NUN9 644 aaPredicted RBP16.49■□□□□ 0.23
CDPF1-203ENST00000404583 SESTD1Q86VW0 696 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 NOSTRINQ8IVI9 506 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 GLG1Q92896 1179 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 INTS4Q96HW7 963 aaKnown RBP16.49■□□□□ 0.23
CDPF1-203ENST00000404583 RIT2Q99578 217 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 SMARCAD1Q9H4L7 1026 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 GTF2IRD1Q9UHL9 959 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 TBX21Q9UL17 535 aa16.49■□□□□ 0.23
CDPF1-203ENST00000404583 ZNF215Q9UL58 517 aaPredicted RBP16.49■□□□□ 0.23
CDPF1-203ENST00000404583 KIAA0355O15063 1070 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 SUPT20HL2P0C7V6 817 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 ZNF200P98182 395 aaPredicted RBP16.48■□□□□ 0.23
CDPF1-203ENST00000404583 MDM2Q00987 491 aaPredicted RBP16.48■□□□□ 0.23
CDPF1-203ENST00000404583 KRT76Q01546 638 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 HIC1Q14526 733 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 HAS1Q92839 578 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 TEKT3Q9BXF9 490 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 PRO3102Q9H379 93 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 UNC45AQ9H3U1 944 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 AZI2Q9H6S1 392 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 KCNMB3Q9NPA1 279 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 TCEAL9Q9UHQ7 104 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 LTBP2Q14767 1821 aa16.48■□□□□ 0.23
CDPF1-203ENST00000404583 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 CHMP2AO43633 222 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 SMIM10L2AP0DMW4 78 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 SMIM10L2BP0DMW5 78 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 CYP2C9P11712 490 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 RAG1P15918 1043 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 STAT5BP51692 787 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 PTGISQ16647 500 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 MIS18BP1Q6P0N0 1132 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
CDPF1-203ENST00000404583 SMAP1Q8IYB5 467 aaPredicted RBP16.47■□□□□ 0.23
CDPF1-203ENST00000404583 ERAP1Q9NZ08 941 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 NOD1Q9Y239 953 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 SAMM50Q9Y512 469 aa16.47■□□□□ 0.23
CDPF1-203ENST00000404583 BACH1O14867 736 aa16.46■□□□□ 0.23
CDPF1-203ENST00000404583 TBX3O15119 743 aa16.46■□□□□ 0.23
CDPF1-203ENST00000404583 MARCH6O60337 910 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms