RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 WDR78Q5VTH9 848 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 SV2BQ7L1I2 683 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 DNERQ8NFT8 737 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 CCDC47Q96A33 483 aaKnown RBP23.52■■□□□ 1.36
TPM1-208ENST00000404484 NUDT12Q9BQG2 462 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 TEKT3Q9BXF9 490 aa23.52■■□□□ 1.36
TPM1-208ENST00000404484 IPO5O00410 1097 aaKnown RBP23.51■■□□□ 1.35
TPM1-208ENST00000404484 ITGB5P18084 799 aa23.51■■□□□ 1.35
TPM1-208ENST00000404484 MORN1Q5T089 497 aa23.51■■□□□ 1.35
TPM1-208ENST00000404484 NCAPG2Q86XI2 1143 aa23.51■■□□□ 1.35
TPM1-208ENST00000404484 SLAIN1Q8ND83 568 aa23.51■■□□□ 1.35
TPM1-208ENST00000404484 PXYLP1Q8TE99 480 aa23.51■■□□□ 1.35
TPM1-208ENST00000404484 LARP4BQ92615 738 aaKnown RBP23.51■■□□□ 1.35
TPM1-208ENST00000404484 USP6NLQ92738 828 aa23.51■■□□□ 1.35
TPM1-208ENST00000404484 MTRQ99707 1265 aa23.51■■□□□ 1.35
TPM1-208ENST00000404484 GTPBP4Q9BZE4 634 aaKnown RBP23.51■■□□□ 1.35
TPM1-208ENST00000404484 MYCLP12524 364 aaPredicted RBP23.5■■□□□ 1.35
TPM1-208ENST00000404484 ERCC3P19447 782 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 CYP2B6P20813 491 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 RPA1P27694 616 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 MRPS9P82933 396 aaKnown RBP23.5■■□□□ 1.35
TPM1-208ENST00000404484 MTMR1Q13613 665 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 IQCB1Q15051 598 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 LUZP1Q86V48 1076 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 VSIG10LQ86VR7 867 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 RAD54LQ92698 747 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 IWS1Q96ST2 819 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 KCNH7Q9NS40 1196 aa23.5■■□□□ 1.35
TPM1-208ENST00000404484 A0A087WWV3 80 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 SMTNL1A8MU46 457 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 MAFGO15525 162 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 NR3C2P08235 984 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 ARP10275 920 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 TPM4P67936 248 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 CUL4BQ13620 913 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 NLRX1Q86UT6 975 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 SHCBP1Q8NEM2 672 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 STAMQ92783 540 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 GPRASP2Q96D09 838 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 C7orf25Q9BPX7 421 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 POLR3CQ9BUI4 534 aaPredicted RBP23.49■■□□□ 1.35
TPM1-208ENST00000404484 MROH8Q9H579 483 aa23.49■■□□□ 1.35
TPM1-208ENST00000404484 RPN1P04843 607 aaKnown RBP23.48■■□□□ 1.35
TPM1-208ENST00000404484 MUTP22033 750 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 CCDC173Q0VFZ6 552 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 KCNB1Q14721 858 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 MTFR1Q15390 333 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 ISM2Q6H9L7 571 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 SOCS4Q8WXH5 440 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 CDHR1Q96JP9 859 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 UIMC1Q96RL1 719 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 BLZF1Q9H2G9 400 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 AGO4Q9HCK5 861 aaKnown RBP23.48■■□□□ 1.35
TPM1-208ENST00000404484 TBC1D22BQ9NU19 505 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 BLOC1S4Q9NUP1 217 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 ADD3Q9UEY8 706 aaKnown RBP23.48■■□□□ 1.35
TPM1-208ENST00000404484 B4DLN1 442 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 NEK9Q8TD19 979 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 TCEAL9Q9UHQ7 104 aa23.48■■□□□ 1.35
TPM1-208ENST00000404484 PLXNB2O15031 1838 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 SLC15A5A6NIM6 579 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 POTEB2H3BUK9 544 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 IKBKBO14920 756 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 XRCC5P13010 732 aaKnown RBP23.47■■□□□ 1.35
TPM1-208ENST00000404484 GRB14Q14449 540 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 GNPTABQ3T906 1256 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 LRRC15Q8TF66 581 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 MPHOSPH6Q99547 160 aaKnown RBP23.47■■□□□ 1.35
TPM1-208ENST00000404484 TRIM9Q9C026 710 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 TUFT1Q9NNX1 390 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 KIAA1024Q9UPX6 916 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 IVNS1ABPQ9Y6Y0 642 aa23.47■■□□□ 1.35
TPM1-208ENST00000404484 MKI67P46013 3256 aaKnown RBP23.46■■□□□ 1.35
TPM1-208ENST00000404484 POTEB3A0JP26 581 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 POTEFA5A3E0 1075 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 STRNO43815 780 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 CASP1P29466 404 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 MAP2K5Q13163 448 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 CNNM4Q6P4Q7 775 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 POTEBQ6S5H4 581 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 DHX40Q8IX18 779 aaKnown RBP23.46■■□□□ 1.35
TPM1-208ENST00000404484 AOPEPQ8N6M6 819 aa23.46■■□□□ 1.35
TPM1-208ENST00000404484 INPP4AQ96PE3 977 aaPredicted RBP23.46■■□□□ 1.35
TPM1-208ENST00000404484 EIF2AK1Q9BQI3 630 aaKnown RBP23.46■■□□□ 1.35
TPM1-208ENST00000404484 MED24O75448 989 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 INHAP05111 366 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 BMP6P22004 513 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 RGS2P41220 211 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 RGS19P49795 217 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 MCM6Q14566 821 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 EPHA7Q15375 998 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 B3GNT9Q6UX72 402 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 CATSPER3Q86XQ3 398 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 ZFP91Q96JP5 570 aaPredicted RBP23.45■■□□□ 1.34
TPM1-208ENST00000404484 PURBQ96QR8 312 aaKnown RBP23.45■■□□□ 1.34
TPM1-208ENST00000404484 BMP2KQ9NSY1 1161 aaPredicted RBP23.45■■□□□ 1.34
TPM1-208ENST00000404484 DNM3Q9UQ16 869 aa23.45■■□□□ 1.34
TPM1-208ENST00000404484 ASIC1P78348 528 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 STXBP2Q15833 593 aa23.44■■□□□ 1.34
TPM1-208ENST00000404484 ECM1Q16610 540 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms