RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 TPH2Q8IWU9 490 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 PAGR1Q9BTK6 254 aa28.57■■■□□ 2.16
CPNE1-205ENST00000401607 TESPA1A2RU30 521 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-205ENST00000401607 MUTP22033 750 aa28.56■■■□□ 2.16
CPNE1-205ENST00000401607 TPD52L1Q16890 204 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-205ENST00000401607 PANK4Q9NVE7 773 aa28.56■■■□□ 2.16
CPNE1-205ENST00000401607 WRAP73Q9P2S5 460 aaPredicted RBP28.56■■■□□ 2.16
CPNE1-205ENST00000401607 FBXO40Q9UH90 709 aa28.56■■■□□ 2.16
CPNE1-205ENST00000401607 ATP9AO75110 1047 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 PSMD2Q13200 908 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 TTI2Q6NXR4 508 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 INPP4AQ96PE3 977 aaPredicted RBP28.55■■■□□ 2.16
CPNE1-205ENST00000401607 BHMT2Q9H2M3 363 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 TBC1D22BQ9NU19 505 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 FRMD3A2A2Y4 597 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 CCNE1P24864 410 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 CACNB1Q02641 598 aaPredicted RBP28.55■■■□□ 2.16
CPNE1-205ENST00000401607 P2RX5Q93086 422 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 GPRASP2Q96D09 838 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 MOV10L1Q9BXT6 1211 aaKnown RBP28.55■■■□□ 2.16
CPNE1-205ENST00000401607 TXNRD2Q9NNW7 524 aa28.55■■■□□ 2.16
CPNE1-205ENST00000401607 ASTN1O14525 1302 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 OSBPP22059 807 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 MIER3Q7Z3K6 550 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 FILIP1Q7Z7B0 1213 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 ANKRD35Q8N283 1001 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 NEK9Q8TD19 979 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 PIGOQ8TEQ8 1089 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 RBPJLQ9UBG7 517 aa28.54■■■□□ 2.16
CPNE1-205ENST00000401607 PFASO15067 1338 aa28.53■■■□□ 2.16
CPNE1-205ENST00000401607 RGS20O76081 388 aa28.53■■■□□ 2.16
CPNE1-205ENST00000401607 MSNP26038 577 aaKnown RBP28.53■■■□□ 2.16
CPNE1-205ENST00000401607 FKBP1BP68106 108 aa28.53■■■□□ 2.16
CPNE1-205ENST00000401607 TMC6Q7Z403 805 aa28.53■■■□□ 2.16
CPNE1-205ENST00000401607 NCAPG2Q86XI2 1143 aa28.53■■■□□ 2.16
CPNE1-205ENST00000401607 CCDC65Q8IXS2 484 aa28.53■■■□□ 2.16
CPNE1-205ENST00000401607 LXNQ9BS40 222 aa28.53■■■□□ 2.16
CPNE1-205ENST00000401607 GBA2Q9HCG7 927 aaPredicted RBP28.53■■■□□ 2.16
CPNE1-205ENST00000401607 RAD51AP2Q09MP3 1159 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 GIT2Q14161 759 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 NLRX1Q86UT6 975 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 GLIS3Q8NEA6 775 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 DUSP9Q99956 384 aaKnown RBP28.52■■■□□ 2.16
CPNE1-205ENST00000401607 R3HDMLQ9H3Y0 253 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 IMPACTQ9P2X3 320 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 PCDHA2Q9Y5H9 948 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 A0A1B0GTH6 734 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 KRT18P05783 430 aaKnown RBP28.52■■■□□ 2.16
CPNE1-205ENST00000401607 CNTN2Q02246 1040 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 FAM26FQ5R3K3 315 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 VSTM4Q8IW00 320 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 GUF1Q8N442 669 aaKnown RBP28.52■■■□□ 2.16
CPNE1-205ENST00000401607 BANK1Q8NDB2 785 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 DNERQ8NFT8 737 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 RUSC1Q9BVN2 902 aa28.52■■■□□ 2.16
CPNE1-205ENST00000401607 ZBTB39O15060 712 aa28.51■■■□□ 2.15
CPNE1-205ENST00000401607 ANKRD40Q6AI12 368 aa28.51■■■□□ 2.15
CPNE1-205ENST00000401607 IRF2BP1Q8IU81 584 aa28.51■■■□□ 2.15
CPNE1-205ENST00000401607 TRIM47Q96LD4 638 aa28.51■■■□□ 2.15
CPNE1-205ENST00000401607 REEP2Q9BRK0 252 aa28.51■■■□□ 2.15
CPNE1-205ENST00000401607 SEMA6BQ9H3T3 888 aa28.51■■■□□ 2.15
CPNE1-205ENST00000401607 BICDL2A1A5D9 508 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 MAFGO15525 162 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 ERCC3P19447 782 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 ARID5BQ14865 1188 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 NR1I3Q14994 352 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 Q3C1V9 767 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 CENPPQ6IPU0 288 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 CACTINQ8WUQ7 758 aaKnown RBP28.5■■■□□ 2.15
CPNE1-205ENST00000401607 NACC1Q96RE7 527 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 IWS1Q96ST2 819 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 FGFBP2Q9BYJ0 223 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 LIMA1Q9UHB6 759 aaKnown RBP28.5■■■□□ 2.15
CPNE1-205ENST00000401607 STAM2O75886 525 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 LRRC41Q15345 812 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 PTPN21Q16825 1174 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 RINT1Q6NUQ1 792 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 MS4A4AQ96JQ5 239 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 NMRK2Q9NPI5 230 aa28.5■■■□□ 2.15
CPNE1-205ENST00000401607 ADD3Q9UEY8 706 aaKnown RBP28.5■■■□□ 2.15
CPNE1-205ENST00000401607 CELF2O95319 508 aaKnown RBP28.49■■■□□ 2.15
CPNE1-205ENST00000401607 SLC25A27O95847 323 aa28.49■■■□□ 2.15
CPNE1-205ENST00000401607 CCNE2O96020 404 aa28.49■■■□□ 2.15
CPNE1-205ENST00000401607 P4HBP07237 508 aaKnown RBP28.49■■■□□ 2.15
CPNE1-205ENST00000401607 SPAG1Q07617 926 aa28.49■■■□□ 2.15
CPNE1-205ENST00000401607 LRMPQ12912 555 aa28.49■■■□□ 2.15
CPNE1-205ENST00000401607 KRT31Q15323 416 aa28.49■■■□□ 2.15
CPNE1-205ENST00000401607 TCP11X2Q5H9J9 407 aa28.49■■■□□ 2.15
CPNE1-205ENST00000401607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.49■■■□□ 2.153e-8■□□□□ 9.3
CPNE1-205ENST00000401607 SRRTQ9BXP5 876 aaKnown RBP28.49■■■□□ 2.15
CPNE1-205ENST00000401607 THAP9Q9H5L6 903 aa28.49■■■□□ 2.15
CPNE1-205ENST00000401607 KIAA1217Q5T5P2 1943 aa28.48■■■□□ 2.15
CPNE1-205ENST00000401607 KCNJ18B7U540 433 aa28.48■■■□□ 2.15
CPNE1-205ENST00000401607 KCNA2P16389 499 aa28.48■■■□□ 2.15
CPNE1-205ENST00000401607 ALDH5A1P51649 535 aaPredicted RBP28.48■■■□□ 2.15
CPNE1-205ENST00000401607 FSTL1Q12841 308 aa28.48■■■□□ 2.15
CPNE1-205ENST00000401607 KCNJ12Q14500 433 aa28.48■■■□□ 2.15
CPNE1-205ENST00000401607 HERC4Q5GLZ8 1057 aaPredicted RBP28.48■■■□□ 2.15
CPNE1-205ENST00000401607 CTAGE1Q96RT6 745 aa28.48■■■□□ 2.15
CPNE1-205ENST00000401607 LRRC10BA6NIK2 292 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms