RNA–Protein interactions for RNA: ENST00000400634.2

RSPO4-202, Transcript of R-spondin 4, humanhuman

TSL 1 (best) BASIC

Gene RSPO4, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4-202ENST00000400634 NIPA1Q7RTP0 329 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 TRIM50Q86XT4 487 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 CDX2Q99626 313 aaPredicted RBP27.57■■■□□ 2
RSPO4-202ENST00000400634 SDF4Q9BRK5 362 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 RNPEPQ9H4A4 650 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 ZNF576Q9H609 170 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 TMEM260Q9NX78 707 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 PKD2L1Q9P0L9 805 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 NFASCO94856 1347 aa27.57■■■□□ 2
RSPO4-202ENST00000400634 CPLX1O14810 134 aa27.56■■■□□ 2
RSPO4-202ENST00000400634 ATP2A2P16615 1042 aaKnown RBP27.56■■■□□ 2
RSPO4-202ENST00000400634 ARHGAP4P98171 946 aa27.56■■■□□ 2
RSPO4-202ENST00000400634 TRIM71Q2Q1W2 868 aaKnown RBP27.56■■■□□ 2
RSPO4-202ENST00000400634 NCOA5Q9HCD5 579 aaKnown RBP27.56■■■□□ 2
RSPO4-202ENST00000400634 MEIS1O00470 390 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 CAND2O75155 1236 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 PBX2P40425 430 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 HIC1Q14526 733 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 CYP2W1Q8TAV3 490 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 PHOSPHO2Q8TCD6 241 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 SLC9A7Q96T83 725 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 SMARCAD1Q9H4L7 1026 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 SH3GLB2Q9NR46 395 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 ERAP1Q9NZ08 941 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 SLC9A2Q9UBY0 812 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 TELO2Q9Y4R8 837 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 EMSYQ7Z589 1322 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 NRCAMQ92823 1304 aa27.55■■■□□ 2
RSPO4-202ENST00000400634 GSTTP1A0A1W2PQM5 241 aa27.54■■■□□ 2
RSPO4-202ENST00000400634 CXCL10P02778 98 aa27.54■■■□□ 2
RSPO4-202ENST00000400634 SSRP1Q08945 709 aaKnown RBP27.54■■■□□ 2
RSPO4-202ENST00000400634 ZNF618Q5T7W0 954 aa27.54■■■□□ 2
RSPO4-202ENST00000400634 GLG1Q92896 1179 aa27.54■■■□□ 2
RSPO4-202ENST00000400634 CYP3A4P08684 503 aa27.53■■■□□ 2
RSPO4-202ENST00000400634 THPOP40225 353 aa27.53■■■□□ 2
RSPO4-202ENST00000400634 CNKSR3Q6P9H4 555 aa27.53■■■□□ 2
RSPO4-202ENST00000400634 WNT8BQ93098 351 aa27.53■■■□□ 2
RSPO4-202ENST00000400634 AGO4Q9HCK5 861 aaKnown RBP27.53■■■□□ 2
RSPO4-202ENST00000400634 SETD4Q9NVD3 440 aa27.53■■■□□ 2
RSPO4-202ENST00000400634 PCDHA11Q9Y5I1 949 aa27.53■■■□□ 2
RSPO4-202ENST00000400634 TREHO43280 583 aa27.52■■■□□ 2
RSPO4-202ENST00000400634 ARP10275 920 aa27.52■■■□□ 2
RSPO4-202ENST00000400634 CRYGNQ8WXF5 182 aa27.52■■■□□ 2
RSPO4-202ENST00000400634 TNPO1Q92973 898 aaKnown RBP27.52■■■□□ 2
RSPO4-202ENST00000400634 AZI2Q9H6S1 392 aa27.52■■■□□ 2
RSPO4-202ENST00000400634 SLC28A3Q9HAS3 691 aa27.52■■■□□ 2
RSPO4-202ENST00000400634 RSPH10B2B2RC85 870 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 NBNO60934 754 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 EFCAB14O75071 495 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 DEXIO95424 95 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 RSPH10BP0C881 870 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 KCNJ6P48051 423 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 SETQ01105 290 aaPredicted RBP27.51■■□□□ 1.99
RSPO4-202ENST00000400634 GPNMBQ14956 572 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 TRAF7Q6Q0C0 670 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 PLA2G4DQ86XP0 818 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 FAM177A1Q8N128 213 aaPredicted RBP27.51■■□□□ 1.99
RSPO4-202ENST00000400634 LMBR1Q8WVP7 490 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 VPS54Q9P1Q0 977 aa27.51■■□□□ 1.99
RSPO4-202ENST00000400634 MYH9P35579 1960 aaKnown RBP27.51■■□□□ 1.99
RSPO4-202ENST00000400634 PPFIA3O75145 1194 aa27.5■■□□□ 1.99
RSPO4-202ENST00000400634 LGR5O75473 907 aa27.5■■□□□ 1.99
RSPO4-202ENST00000400634 ADAM17P78536 824 aa27.5■■□□□ 1.99
RSPO4-202ENST00000400634 GRIN2CQ14957 1233 aa27.5■■□□□ 1.99
RSPO4-202ENST00000400634 ANKRD1Q15327 319 aa27.5■■□□□ 1.99
RSPO4-202ENST00000400634 MYLIPQ8WY64 445 aa27.5■■□□□ 1.99
RSPO4-202ENST00000400634 ABHD14A-ACY1A0A1B0GW23 586 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 KIF28PB7ZC32 967 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 FAM86B1E9PN63 330 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 CDKL5O76039 1030 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 FAM86B2P0C5J1 330 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 FOSL2P15408 326 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 NLRP5P59047 1200 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 ACTR2P61160 394 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 PPFIA1Q13136 1202 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 STK3Q13188 491 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 ITGB3BPQ13352 177 aaPredicted RBP27.49■■□□□ 1.99
RSPO4-202ENST00000400634 LARP6Q9BRS8 491 aaKnown RBP27.49■■□□□ 1.99
RSPO4-202ENST00000400634 PTPRSQ13332 1948 aa27.49■■□□□ 1.99
RSPO4-202ENST00000400634 MICAL3Q7RTP6 2002 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 CHD9Q3L8U1 2897 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 MARK3P27448 753 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 RABGGTBP53611 331 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 IKBKEQ14164 716 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 TAF2Q6P1X5 1199 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 SLC17A8Q8NDX2 589 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 C22orf23Q9BZE7 217 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 SLKQ9H2G2 1235 aaPredicted RBP27.48■■□□□ 1.99
RSPO4-202ENST00000400634 NKX2-4Q9H2Z4 354 aa27.48■■□□□ 1.99
RSPO4-202ENST00000400634 YBX2Q9Y2T7 364 aaKnown RBP27.48■■□□□ 1.99
RSPO4-202ENST00000400634 IGLV3-22A0A075B6J6 115 aa27.47■■□□□ 1.99
RSPO4-202ENST00000400634 MBTPS1Q14703 1052 aa27.47■■□□□ 1.99
RSPO4-202ENST00000400634 PLPPR4Q7Z2D5 763 aa27.47■■□□□ 1.99
RSPO4-202ENST00000400634 IL17RAQ96F46 866 aa27.47■■□□□ 1.99
RSPO4-202ENST00000400634 RRN3P2A6NIE6 340 aa27.46■■□□□ 1.99
RSPO4-202ENST00000400634 IPO5O00410 1097 aaKnown RBP27.46■■□□□ 1.99
RSPO4-202ENST00000400634 ATG7O95352 703 aa27.46■■□□□ 1.99
RSPO4-202ENST00000400634 RPLP2P05387 115 aaKnown RBP27.46■■□□□ 1.99
RSPO4-202ENST00000400634 CIITAP33076 1130 aa27.46■■□□□ 1.99
RSPO4-202ENST00000400634 SLC26A2P50443 739 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms