RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 KCNQ2O43526 872 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 KCNA6P17658 529 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 CAP1Q01518 475 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 RTP5Q14D33 572 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 GPR19Q15760 415 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 C21orf62-AS1Q17RA5 79 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 PAN2Q504Q3 1202 aaKnown RBP6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 PHF19Q5T6S3 580 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 LIPIQ6XZB0 460 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 MARCH10Q8NA82 808 aaPredicted RBP6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 KYQ8NBH2 561 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 KCNC2Q96PR1 638 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 SPATA25Q9BR10 227 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 SMURF1Q9HCE7 757 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 SRPK3Q9UPE1 567 aa6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 MRPL42Q9Y6G3 142 aaKnown RBP6.6□□□□□ -1.35
SAMSN1-202ENST00000400564 SH3D21A4FU49 640 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 ZNF561-AS1K7EIQ3 104 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 FAHP16930 419 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 THBS2P35442 1172 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 EPHA5P54756 1037 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 SLURP1P55000 103 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 FAM47CQ5HY64 1035 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 FSTL4Q6MZW2 842 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 FEZF2Q8TBJ5 459 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 NGRNQ9NPE2 291 aaKnown RBP6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 JAG2Q9Y219 1238 aa6.59□□□□□ -1.35
SAMSN1-202ENST00000400564 FAM90A27PA6NNH2 459 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 SMARCA5O60264 1052 aaPredicted RBP6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 IGSF3O75054 1194 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 INHBBP09529 407 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 SDSP20132 328 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 CTSWP56202 376 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 ZNF460Q14592 562 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 CRY1Q16526 586 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 FNDC3BQ53EP0 1204 aaKnown RBP6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 FANCLQ9NW38 375 aa6.58□□□□□ -1.36
SAMSN1-202ENST00000400564 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 DNAJC8O75937 253 aaPredicted RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 TKFCQ3LXA3 575 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 BTBD8Q5XKL5 378 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 CPZQ66K79 652 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 CARFQ8N187 725 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 IGSF22Q8N9C0 903 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 CELF4Q9BZC1 486 aaKnown RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 ZCCHC4Q9H5U6 513 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 PCDH18Q9HCL0 1135 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 PARD6AQ9NPB6 346 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 RIC8BQ9NVN3 520 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 NUB1Q9Y5A7 615 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 CD2APQ9Y5K6 639 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 OTOL1A6NHN0 477 aaPredicted RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 GSTA4O15217 222 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 PTPN1P18031 435 aaKnown RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 LACTBP83111 547 aaPredicted RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 PABPC4Q13310 644 aaKnown RBP eCLIP6.57□□□□□ -1.363e-6■■■■□ 20.7
SAMSN1-202ENST00000400564 TM4SF20Q53R12 229 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 FIGNQ5HY92 759 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 CD276Q5ZPR3 534 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 TTLL7Q6ZT98 887 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 OVCH1Q7RTY7 1134 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 ZDHHC14Q8IZN3 488 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 TTLL6Q8N841 843 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 PDGFDQ9GZP0 370 aaPredicted RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 HSPBP1Q9NZL4 362 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 NTMQ9P121 344 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 CROTQ9UKG9 612 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 TNPO3Q9Y5L0 923 aaKnown RBP6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 ATP23Q9Y6H3 246 aa6.57□□□□□ -1.36
SAMSN1-202ENST00000400564 RPL13P26373 211 aaKnown RBP6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 KCNC1P48547 511 aa6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 SARSP49591 514 aaKnown RBP6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 MLLT6P55198 1093 aaPredicted RBP6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 SEC23AQ15436 765 aa6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 VASNQ6EMK4 673 aa6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 HOMER1Q86YM7 354 aa6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 NLGN4XQ8N0W4 816 aa6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 XYLT2Q9H1B5 865 aa6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 LUC7LQ9NQ29 371 aaKnown RBP6.56□□□□□ -1.36
SAMSN1-202ENST00000400564 LOC105371045A0A1W2PR82 267 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 DDX3XO00571 662 aaKnown RBP eCLIP6.55□□□□□ -1.364e-18■□□□□ 9.2
SAMSN1-202ENST00000400564 SCDO00767 359 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 OPA1O60313 960 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 GLRX3O76003 335 aaKnown RBP6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 PFKPQ01813 784 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 TMEM177Q53S58 311 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 NOSTRINQ8IVI9 506 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 SP8Q8IXZ3 490 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 DTX3Q8N9I9 347 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 ADAMTS17Q8TE56 1095 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 ZCCHC14Q8WYQ9 949 aaKnown RBP6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 APPBP2Q92624 585 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 TMEM209Q96SK2 561 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 SLC39A2Q9NP94 309 aa6.55□□□□□ -1.36
SAMSN1-202ENST00000400564 SASH1O94885 1247 aa6.54□□□□□ -1.36
SAMSN1-202ENST00000400564 APPP05067 770 aa6.54□□□□□ -1.36
SAMSN1-202ENST00000400564 HOXA5P20719 270 aa6.54□□□□□ -1.36
SAMSN1-202ENST00000400564 IGFALSP35858 605 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms