RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 NPR1P16066 1061 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 ARL4AP40617 200 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 MSTO1Q9BUK6 570 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 TYW1Q9NV66 732 aaKnown RBP14.87□□□□□ -0.03
VAPA-202ENST00000400000 MTMR6Q9Y217 621 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 ZNF335Q9H4Z2 1342 aaPredicted RBP14.87□□□□□ -0.03
VAPA-202ENST00000400000 CREB3O43889 395 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 CCT5P48643 541 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 FAM83BQ5T0W9 1011 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 MAP7D3Q8IWC1 876 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 RBM46Q8TBY0 533 aaKnown RBP14.87□□□□□ -0.03
VAPA-202ENST00000400000 STAG1Q8WVM7 1258 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 MAML1Q92585 1016 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 OTUD5Q96G74 571 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 TSPYL2Q9H2G4 693 aaPredicted RBP14.87□□□□□ -0.03
VAPA-202ENST00000400000 HPS4Q9NQG7 708 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 GJB4Q9NTQ9 266 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 ADD3Q9UEY8 706 aaKnown RBP14.87□□□□□ -0.03
VAPA-202ENST00000400000 LRRD1A4D1F6 860 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 MSH2P43246 934 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 USP14P54578 494 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 BCAS4Q8TDM0 211 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 N4BP2L2Q92802 583 aaPredicted RBP14.87□□□□□ -0.03
VAPA-202ENST00000400000 WRNIP1Q96S55 665 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 GINM1Q9NU53 330 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 MLH3Q9UHC1 1453 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 NEMP1O14524 444 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 GH2P01242 217 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 EEF1B2P24534 225 aaKnown RBP14.87□□□□□ -0.03
VAPA-202ENST00000400000 CC2D2BQ6DHV5 1058 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 TTC25Q96NG3 672 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 PIDD1Q9HB75 910 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 ABCB11O95342 1321 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 AOX1Q06278 1338 aa14.87□□□□□ -0.03
VAPA-202ENST00000400000 CCDC195A0A1B0GUA6 201 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 PRPSAP2O60256 369 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 PCGF5Q86SE9 256 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 ZNF215Q9UL58 517 aaPredicted RBP14.86□□□□□ -0.03
VAPA-202ENST00000400000 DENND3A2RUS2 1198 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 E2F5Q15329 346 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 KIF19Q2TAC6 998 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 TTLL6Q8N841 843 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 CTTNBP2Q8WZ74 1663 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 SYNE4Q8N205 404 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 CACTINQ8WUQ7 758 aaKnown RBP14.86□□□□□ -0.03
VAPA-202ENST00000400000 SAMSN1Q9NSI8 373 aaKnown RBP14.86□□□□□ -0.03
VAPA-202ENST00000400000 PYCARDQ9ULZ3 195 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 STX1BP61266 288 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 IFT88Q13099 833 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 TUBB2AQ13885 445 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 SPATA1Q5VX52 437 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 MYRIPQ8NFW9 859 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 TUBB2BQ9BVA1 445 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 MAN1B1Q9UKM7 699 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 XPOTO43592 962 aaKnown RBP14.86□□□□□ -0.03
VAPA-202ENST00000400000 NMT2O60551 498 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 PLEKHA8P1O95397 391 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 NACC1Q96RE7 527 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 HEMGNQ9BXL5 484 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 VCX3AQ9NNX9 186 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 LONP1P36776 959 aaKnown RBP14.86□□□□□ -0.03
VAPA-202ENST00000400000 ARHGAP25P42331 645 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 NUMBP49757 651 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 DPCR1Q3MIW9 517 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 ZNF449Q6P9G9 518 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 C11orf57Q6ZUT1 292 aaPredicted RBP14.86□□□□□ -0.03
VAPA-202ENST00000400000 ZSWIM6Q9HCJ5 1215 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 NGRNQ9NPE2 291 aaKnown RBP14.86□□□□□ -0.03
VAPA-202ENST00000400000 HOMER3Q9NSC5 361 aa14.86□□□□□ -0.03
VAPA-202ENST00000400000 UPP2O95045 317 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 RSBN1LQ6PCB5 846 aaPredicted RBP14.85□□□□□ -0.03
VAPA-202ENST00000400000 CARMIL3Q8ND23 1372 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 PLCG1P19174 1290 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 BBS9Q3SYG4 887 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 MYO1EQ12965 1108 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 NME3Q13232 169 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 SUSD4Q5VX71 490 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 CATSPER4Q7RTX7 472 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 PPP1R13BQ96KQ4 1090 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 CYTH2Q99418 400 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 SERPINB13Q9UIV8 391 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 TLK1Q9UKI8 766 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 PCDHB6Q9Y5E3 794 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 PCDHA5Q9Y5H7 936 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 HNRNPCL2B2RXH8 293 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 HNRNPCL1O60812 293 aaKnown RBP14.85□□□□□ -0.03
VAPA-202ENST00000400000 ZSCAN26Q16670 478 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 RNF219Q5W0B1 726 aaPredicted RBP14.85□□□□□ -0.03
VAPA-202ENST00000400000 RASEFQ8IZ41 740 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 PPP1R36Q96LQ0 422 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 HEY1Q9Y5J3 304 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 PLA2G4BP0C869 781 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 VCPP55072 806 aaKnown RBP14.85□□□□□ -0.03
VAPA-202ENST00000400000 ASPRV1Q53RT3 343 aa14.85□□□□□ -0.03
VAPA-202ENST00000400000 INTS9Q9NV88 658 aaKnown RBP14.85□□□□□ -0.03
VAPA-202ENST00000400000 ABCC4O15439 1325 aa14.84□□□□□ -0.03
VAPA-202ENST00000400000 CMA1P23946 247 aa14.84□□□□□ -0.03
VAPA-202ENST00000400000 KCNG1Q9UIX4 513 aa14.84□□□□□ -0.03
VAPA-202ENST00000400000 ARAP3Q8WWN8 1544 aa14.84□□□□□ -0.03
VAPA-202ENST00000400000 EVI5O60447 810 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms