RNA–Protein interactions for RNA: ENST00000399878.7

SEL1L3-202, Transcript of SEL1L family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L3, Length 4,520 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-202ENST00000399878 ANKRD40Q6AI12 368 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 VPS18Q9P253 973 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 XRN1Q8IZH2 1706 aaKnown RBP19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 PPP1R7Q15435 360 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 FAM20AQ96MK3 541 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 LXNQ9BS40 222 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 DISP2A7MBM2 1401 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 H2AFZP0C0S5 128 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 H2AFVQ71UI9 128 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 NLRP4Q96MN2 994 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 HACL1Q9UJ83 578 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 SLC16A4O15374 487 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 PRELPP51888 382 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 MYL7Q01449 175 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 APOBEC3HQ6NTF7 200 aaKnown RBP19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 SWSAP1Q6NVH7 229 aa19.72■□□□□ 0.75
SEL1L3-202ENST00000399878 KIAA0754O94854 1291 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 THAP9Q9H5L6 903 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 RABEP2Q9H5N1 569 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 MRC1P22897 1456 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 MYMKA6NI61 221 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 ACTN4O43707 911 aaKnown RBP19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 MFAP3LO75121 409 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 AKT3Q9Y243 479 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 GAP43P17677 238 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 NMT1P30419 496 aaKnown RBP19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 HOXA10P31260 410 aaPredicted RBP19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 SESTD1Q86VW0 696 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 CCSER1Q9C0I3 900 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 HOXC10Q9NYD6 342 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 GABBR1Q9UBS5 961 aa19.71■□□□□ 0.75
SEL1L3-202ENST00000399878 SPDYE2BA6NHP3 402 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 SPDYE6P0CI01 402 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 MAP3K14Q99558 947 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 NUCKS1Q9H1E3 243 aaKnown RBP19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 C1orf112Q9NSG2 853 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 TTC26A0AVF1 554 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 NDUFA10O95299 355 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 CYFIP1Q7L576 1253 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 MMS19Q96T76 1030 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 IRX2Q9BZI1 471 aaPredicted RBP19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 PLSCR1O15162 318 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 CYTH3O43739 400 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 TM4SF1P30408 202 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 SHMT1P34896 483 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 SEL1L2Q5TEA6 688 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 GOLGA5Q8TBA6 731 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 GBP2P32456 591 aaPredicted RBP19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 USP11P51784 963 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 ZBED6P86452 979 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 CDAN1Q8IWY9 1227 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 ATG4CQ96DT6 458 aa19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 MRRFQ96E11 262 aaKnown RBP19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 NHEJ1Q9H9Q4 299 aaPredicted RBP19.7■□□□□ 0.74
SEL1L3-202ENST00000399878 LRRC63Q05C16 580 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 PPP1R18Q6NYC8 613 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 NSUN6Q8TEA1 469 aaKnown RBP19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 ACCSQ96QU6 501 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 VPS41P49754 854 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 DPYDQ12882 1025 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 KCNF1Q9H3M0 494 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 FTCDO95954 541 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 TMEM191BP0C7N4 346 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 NBPF12Q5TAG4 269 aaPredicted RBP19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 TUBE1Q9UJT0 475 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 PNMA2Q9UL42 364 aa19.69■□□□□ 0.74
SEL1L3-202ENST00000399878 OSBPP22059 807 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 TFAMQ00059 246 aaKnown RBP19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 PSMD2Q13200 908 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 MIS18BP1Q6P0N0 1132 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 POTEAQ6S8J7 498 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 APOBEC3FQ8IUX4 373 aaKnown RBP19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 TRIM58Q8NG06 486 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 UBLCP1Q8WVY7 318 aaPredicted RBP19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 UBE2TQ9NPD8 197 aaPredicted RBP19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 LGALS16A8MUM7 142 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 RHBDL3P58872 404 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 DACT2Q5SW24 774 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 SLC16A10Q8TF71 515 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 SHTN1A0MZ66 631 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 ZEB2O60315 1214 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 TRIM49P0CI25 452 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 TRIM49CP0CI26 452 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 GCLMP48507 274 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 ZNF354CQ86Y25 554 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 FBXO41Q8TF61 875 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 CDHR1Q96JP9 859 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 CHD2O14647 1828 aaKnown RBP19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 CCNA1P78396 465 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 KSR1Q8IVT5 923 aa19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 FAM49AQ9H0Q0 323 aaPredicted RBP19.68■□□□□ 0.74
SEL1L3-202ENST00000399878 K7ERI5 159 aa19.67■□□□□ 0.74
SEL1L3-202ENST00000399878 MOCS3O95396 460 aa19.67■□□□□ 0.74
SEL1L3-202ENST00000399878 SETQ01105 290 aaPredicted RBP19.67■□□□□ 0.74
SEL1L3-202ENST00000399878 FAM160B1Q5W0V3 765 aa19.67■□□□□ 0.74
SEL1L3-202ENST00000399878 SND1Q7KZF4 910 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■□□□ 13.7
SEL1L3-202ENST00000399878 PODXL2Q9NZ53 605 aa19.67■□□□□ 0.74
SEL1L3-202ENST00000399878 MTUS1Q9ULD2 1270 aa19.67■□□□□ 0.74
SEL1L3-202ENST00000399878 PVALEFA0A1B0GWK0 134 aa19.67■□□□□ 0.74
SEL1L3-202ENST00000399878 AP5Z1O43299 807 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms