RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 UBE2TQ9NPD8 197 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 SUCLA2Q9P2R7 463 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 PTPN22Q9Y2R2 807 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 CDC42BPGQ6DT37 1551 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 GPSM2P81274 684 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 SPP2Q13103 211 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 PPP2R5EQ16537 467 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 CDO1Q16878 200 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 FAM71BQ8TC56 605 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 HSPH1Q92598 858 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 KIF24Q5T7B8 1368 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L15C9J2P7 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L13C9JLJ4 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L11C9JVI0 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L18D6R9N7 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L22D6RA61 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L17D6RBQ6 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L19D6RCP7 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L20D6RJB6 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 KIF3CO14782 793 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 INPP1P49441 399 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 GPC3P51654 580 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 COG7P83436 770 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 USP17L24Q0WX57 530 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 ALCAMQ13740 583 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 TBCCQ15814 346 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 MAPK6Q16659 721 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 MAP3K21Q5TCX8 1036 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 PODNQ7Z5L7 613 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 TMEM247A6NEH6 219 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 TTC4O95801 387 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 ALDH1A1P00352 501 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 CYBBP04839 570 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 DBN1Q16643 649 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 SDE2Q6IQ49 451 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 MRPL47Q9HD33 250 aaKnown RBP13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 RNF146Q9NTX7 359 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 FIS1Q9Y3D6 152 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 JCADQ9P266 1359 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 ABCB11O95342 1321 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 PHLDB2Q86SQ0 1253 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 CBX8Q9HC52 389 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 GOLGA8IPA6NC78 632 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 GOLGA8JA6NMD2 632 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 H2AFZP0C0S5 128 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 PEX3P56589 373 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 NSUN2Q08J23 767 aaKnown RBP eCLIP13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 TTC23LQ6PF05 361 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 H2AFVQ71UI9 128 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 GPR108Q9NPR9 543 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 TLK1Q9UKI8 766 aa13.04□□□□□ -0.32
CACNA1C-213ENST00000399629 PEG3Q9GZU2 1588 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 PFKFB2O60825 505 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 PAMP19021 973 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 ANGPTL8Q6UXH0 198 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 DDX50Q9BQ39 737 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 KATNAL1Q9BW62 490 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 STRIP2Q9ULQ0 834 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 PASKQ96RG2 1323 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 BTBD18B2RXH4 712 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 PRKAB2O43741 272 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 PTK2BQ14289 1009 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 ZNF667Q5HYK9 610 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 ARHGEF1Q92888 912 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 CNOT6LQ96LI5 555 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 VCX3AQ9NNX9 186 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 LRRN2O75325 713 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 CA4P22748 312 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 KRT71Q3SY84 523 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 B4GALNT4Q76KP1 1039 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 SNX19Q92543 992 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 PBXIP1Q96AQ6 731 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 FGD4Q96M96 766 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 MGEA5O60502 916 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 RALAP11233 206 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 CHRNA5P30532 468 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 SF3A3Q12874 501 aaKnown RBP eCLIP13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 ME3Q16798 604 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 FAM117BQ6P1L5 589 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 GBP7Q8N8V2 638 aaPredicted RBP13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 ACAD9Q9H845 621 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 GNGT2O14610 69 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 RNF40O75150 1001 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 OR8K1Q8NGG5 319 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 TSC1Q92574 1164 aa13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 DHX38Q92620 1227 aaKnown RBP13.03□□□□□ -0.32
CACNA1C-213ENST00000399629 GUCY2FP51841 1108 aa13.02□□□□□ -0.32
CACNA1C-213ENST00000399629 LRRC41Q15345 812 aa13.02□□□□□ -0.32
CACNA1C-213ENST00000399629 CFAP36Q96G28 342 aa13.02□□□□□ -0.32
CACNA1C-213ENST00000399629 METP08581 1390 aa13.02□□□□□ -0.32
CACNA1C-213ENST00000399629 EVI5O60447 810 aa13.02□□□□□ -0.32
CACNA1C-213ENST00000399629 ST8SIA6P61647 398 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms