RNA–Protein interactions for RNA: ENST00000399292.7

SMIM11A-201, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11A, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-201ENST00000399292 PPP4R2Q9NY27 417 aa13.6□□□□□ -0.23
SMIM11A-201ENST00000399292 TLR3O15455 904 aaKnown RBP13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 HMGB1P09429 215 aaKnown RBP13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 RXRAP19793 462 aa13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 HOXA13P31271 388 aaPredicted RBP13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 ADCK5Q3MIX3 580 aa13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 CCDC62Q6P9F0 684 aa13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 SRBD1Q8N5C6 995 aaKnown RBP13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 SLC43A3Q8NBI5 491 aa13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 SEC63Q9UGP8 760 aaKnown RBP13.59□□□□□ -0.23
SMIM11A-201ENST00000399292 MCM3APO60318 1980 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 A6NJR5 290 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 TERTO14746 1132 aaKnown RBP13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 KPNA6O60684 536 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 REC8O95072 547 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 ARIH2O95376 493 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 PLEKHA8P1O95397 391 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 TIMP1P01033 207 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 MYL3P08590 195 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 ITGB8P26012 769 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 LY6KQ17RY6 165 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 VSIG10LQ86VR7 867 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 FCHSD1Q86WN1 690 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 RAB11FIP4Q86YS3 637 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 FAM126BQ8IXS8 530 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 CMTR1Q8N1G2 835 aaKnown RBP13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 CCDC82Q8N4S0 544 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 COPS5Q92905 334 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 PDCD2LQ9BRP1 358 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 GRIN2DO15399 1336 aa13.58□□□□□ -0.24
SMIM11A-201ENST00000399292 SOX1O00570 391 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 GH1P01241 217 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 MYCLP12524 364 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 PSMC6P62333 389 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 FGD1P98174 961 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 PURAQ00577 322 aaKnown RBP13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 TRIM46Q7Z4K8 759 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 MICU3Q86XE3 530 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 KCNB2Q92953 911 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 TCEANC2Q96MN5 208 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 MTG1Q9BT17 334 aaPredicted RBP13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 TBX21Q9UL17 535 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 MRVI1Q9Y6F6 885 aa13.57□□□□□ -0.24
SMIM11A-201ENST00000399292 F12P00748 615 aaPredicted RBP13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 CD4P01730 458 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 BMP1P13497 986 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 HSPA4P34932 840 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 PGM5Q15124 567 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 SHHQ15465 462 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 MFSD5Q6N075 450 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 KCNV1Q6PIU1 500 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 APOA5Q6Q788 366 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 TMTC3Q6ZXV5 915 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 CUL5Q93034 780 aa13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 RBM28Q9NW13 759 aaKnown RBP13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 DDX41Q9UJV9 622 aaKnown RBP13.56□□□□□ -0.24
SMIM11A-201ENST00000399292 LCTP09848 1927 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 ZBTB43O43298 467 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 CCND2P30279 289 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 FPGSQ05932 587 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 ARHGAP1Q07960 439 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 LAMC2Q13753 1193 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 BLOC1S2Q6QNY1 142 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 DHX37Q8IY37 1157 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 SMARCC2Q8TAQ2 1214 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 AFG1LQ8WV93 481 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 TRPV6Q9H1D0 765 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 PSTPIP2Q9H939 334 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 MAP10Q9P2G4 905 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 BRPF3Q9ULD4 1205 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 SNX14Q9Y5W7 946 aa13.55□□□□□ -0.24
SMIM11A-201ENST00000399292 KLF18A0A0U1RQI7 1052 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 hCG_1642624A0A1W2PR95 340 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 PIK3CDO00329 1044 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 MEIS2O14770 477 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 EPB41L2O43491 1005 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 WIPF1O43516 503 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 SUPT20HL2P0C7V6 817 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 TGFB3P10600 412 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 CASTP20810 708 aaKnown RBP13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 PSMA5P28066 241 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 RTN1Q16799 776 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 TUSC1Q2TAM9 212 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 NBPF20Q3BBV1 942 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 C9orf50Q5SZB4 431 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 MYSM1Q5VVJ2 828 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 USP17L6PQ6QN14 398 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 TMEM199Q8N511 208 aa13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 ALDH8A1Q9H2A2 487 aaPredicted RBP13.54□□□□□ -0.24
SMIM11A-201ENST00000399292 CUL9Q8IWT3 2517 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 B4GALT4O60513 344 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 STAM2O75886 525 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 MMP3P08254 477 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 CPA1P15085 419 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 EPHB4P54760 987 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
SMIM11A-201ENST00000399292 NNTQ13423 1086 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms