RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 NDST4Q9H3R1 872 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 BCAS3Q9H6U6 928 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 TRIM10Q9UDY6 481 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 HACL1Q9UJ83 578 aa13.04□□□□□ -0.32
COL25A1-202ENST00000399127 EPN1Q9Y6I3 576 aaPredicted RBP13.04□□□□□ -0.32
COL25A1-202ENST00000399127 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
COL25A1-202ENST00000399127 PIK3CDO00329 1044 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 EPHB6O15197 1021 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 KIF5CO60282 957 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 NDUFA10O95299 355 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 VWA3BQ502W6 1294 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 CCDC65Q8IXS2 484 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 ERMNQ8TAM6 284 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 AGBL1Q96MI9 1066 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 TSG101Q99816 390 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 TANGO6Q9C0B7 1094 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 RANBP17Q9H2T7 1088 aaKnown RBP13.03□□□□□ -0.32
COL25A1-202ENST00000399127 PGAP2Q9UHJ9 254 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 DDX41Q9UJV9 622 aaKnown RBP13.03□□□□□ -0.32
COL25A1-202ENST00000399127 VAV3Q9UKW4 847 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 IGLV3-22A0A075B6J6 115 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 TBX3O15119 743 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 INPP5BP32019 993 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 CIITAP33076 1130 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 CASP5P51878 434 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 LDHDQ86WU2 507 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 PIGOQ8TEQ8 1089 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 FAM20AQ96MK3 541 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 BHMT2Q9H2M3 363 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 SYNPO2Q9UMS6 1093 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 DNM3Q9UQ16 869 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 REXO2Q9Y3B8 237 aaKnown RBP13.03□□□□□ -0.32
COL25A1-202ENST00000399127 PCDHA2Q9Y5H9 948 aa13.03□□□□□ -0.32
COL25A1-202ENST00000399127 ZBTB39O15060 712 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 TBC1D12O60347 775 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 TFRCP02786 760 aaKnown RBP13.02□□□□□ -0.32
COL25A1-202ENST00000399127 ASNSP08243 561 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 RPA1P27694 616 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 TNFAIP1Q13829 316 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 CTTNQ14247 550 aaKnown RBP13.02□□□□□ -0.32
COL25A1-202ENST00000399127 PRAMEF18Q5VWM3 479 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 FBXO38Q6PIJ6 1188 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 ILDR2Q71H61 639 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 SCFD1Q8WVM8 642 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 REEP2Q9BRK0 252 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 EPC1Q9H2F5 836 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 ZSWIM4Q9H7M6 989 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 MMRN2Q9H8L6 949 aa13.02□□□□□ -0.32
COL25A1-202ENST00000399127 RSPH10B2B2RC85 870 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 RSPH10BP0C881 870 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 ARHGAP25P42331 645 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 MAN2A1Q16706 1144 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 ZCWPW2Q504Y3 356 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 SLC35F6Q8N357 371 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 SMCR8Q8TEV9 937 aaPredicted RBP13.02□□□□□ -0.33
COL25A1-202ENST00000399127 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 ERGIC2Q96RQ1 377 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 EIF2AK1Q9BQI3 630 aaKnown RBP13.02□□□□□ -0.33
COL25A1-202ENST00000399127 HOMER2Q9NSB8 354 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 EMILIN3Q9NT22 766 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 PKD2L1Q9P0L9 805 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 RNF181Q9P0P0 153 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 GUCA1BQ9UMX6 200 aa13.02□□□□□ -0.33
COL25A1-202ENST00000399127 CYP3A4P08684 503 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 GIT2Q14161 759 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 CCDC40Q4G0X9 1142 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 LRCH2Q5VUJ6 765 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 TPH2Q8IWU9 490 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 CPXCR1Q8N123 301 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 MRFAP1Q9Y605 127 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 PHF20L1A8MW92 1017 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 PLEKP08567 350 aaPredicted RBP13.01□□□□□ -0.33
COL25A1-202ENST00000399127 EPS15P42566 896 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 ZBED6P86452 979 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 FKBP3Q00688 224 aaKnown RBP13.01□□□□□ -0.33
COL25A1-202ENST00000399127 ANGEL2Q5VTE6 544 aaKnown RBP13.01□□□□□ -0.33
COL25A1-202ENST00000399127 EP400NLQ6ZTU2 488 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 SFR1Q86XK3 245 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 TRPM4Q8TD43 1214 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 UBXN4Q92575 508 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 RUSC1Q9BVN2 902 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 DEFB129Q9H1M3 183 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 CCPG1Q9ULG6 757 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 FZD1Q9UP38 647 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 MRPL11Q9Y3B7 192 aaKnown RBP13.01□□□□□ -0.33
COL25A1-202ENST00000399127 ABCB11O95342 1321 aa13.01□□□□□ -0.33
COL25A1-202ENST00000399127 DDNO94850 711 aaPredicted RBP13□□□□□ -0.33
COL25A1-202ENST00000399127 FGFR1OPO95684 399 aaKnown RBP13□□□□□ -0.33
COL25A1-202ENST00000399127 YBX3P16989 372 aaKnown RBP eCLIP13□□□□□ -0.33
COL25A1-202ENST00000399127 CYP27A1Q02318 531 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 PPP2R3AQ06190 1150 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 SYT2Q8N9I0 419 aaPredicted RBP13□□□□□ -0.33
COL25A1-202ENST00000399127 NUP58Q9BVL2 599 aa13□□□□□ -0.33
COL25A1-202ENST00000399127 NHEJ1Q9H9Q4 299 aaPredicted RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms