RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 PSMA7O14818 248 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 CCZ1BP86790 482 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 CCZ1P86791 482 aaPredicted RBP16.85■□□□□ 0.29
COL25A1-201ENST00000399126 EHHADHQ08426 723 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 NR1I3Q14994 352 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 PGM5Q15124 567 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 KRT31Q15323 416 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 SH3D19Q5HYK7 790 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 ANKRD40Q6AI12 368 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 DYDC2Q96IM9 177 aa16.85■□□□□ 0.29
COL25A1-201ENST00000399126 DUSP9Q99956 384 aaKnown RBP16.85■□□□□ 0.29
COL25A1-201ENST00000399126 NKRFO15226 690 aaKnown RBP eCLIP16.84■□□□□ 0.29
COL25A1-201ENST00000399126 IREB2P48200 963 aaKnown RBP16.84■□□□□ 0.29
COL25A1-201ENST00000399126 COASYQ13057 564 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 PIGOQ8TEQ8 1089 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 CCDC47Q96A33 483 aaKnown RBP16.84■□□□□ 0.29
COL25A1-201ENST00000399126 TRIM47Q96LD4 638 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 HSD17B14Q9BPX1 270 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 SEMA6BQ9H3T3 888 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 PVALEFA0A1B0GWK0 134 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 SLITRK3O94933 977 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 ITGB3BPQ13352 177 aaPredicted RBP16.84■□□□□ 0.29
COL25A1-201ENST00000399126 PPP2R5CQ13362 524 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 PCNX4Q63HM2 1172 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 GADL1Q6ZQY3 521 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 TPH2Q8IWU9 490 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 PDCD2LQ9BRP1 358 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 BHMT2Q9H2M3 363 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 TAB2Q9NYJ8 693 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 ADD3Q9UEY8 706 aaKnown RBP16.84■□□□□ 0.29
COL25A1-201ENST00000399126 LCTP09848 1927 aa16.84■□□□□ 0.29
COL25A1-201ENST00000399126 STIM1Q13586 685 aa16.83■□□□□ 0.29
COL25A1-201ENST00000399126 P2RX5Q93086 422 aa16.83■□□□□ 0.29
COL25A1-201ENST00000399126 SRRTQ9BXP5 876 aaKnown RBP16.83■□□□□ 0.29
COL25A1-201ENST00000399126 VPS16Q9H269 839 aa16.83■□□□□ 0.29
COL25A1-201ENST00000399126 PANK4Q9NVE7 773 aa16.83■□□□□ 0.29
COL25A1-201ENST00000399126 IMPACTQ9P2X3 320 aa16.83■□□□□ 0.29
COL25A1-201ENST00000399126 KIAA1217Q5T5P2 1943 aa16.83■□□□□ 0.29
COL25A1-201ENST00000399126 FRMPD4Q14CM0 1322 aa16.83■□□□□ 0.29
COL25A1-201ENST00000399126 KCNJ18B7U540 433 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 FDX1P10109 184 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 KCNJ12Q14500 433 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 NOLC1Q14978 699 aaKnown RBP eCLIP16.83■□□□□ 0.28
COL25A1-201ENST00000399126 TCP11X2Q5H9J9 407 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 RBM46Q8TBY0 533 aaKnown RBP16.83■□□□□ 0.28
COL25A1-201ENST00000399126 TEX13BQ9BXU2 312 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 DNM3Q9UQ16 869 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 UBIAD1Q9Y5Z9 338 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 PSEN1P49768 467 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 B3GNT9Q6UX72 402 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 DHTKD1Q96HY7 919 aaPredicted RBP16.83■□□□□ 0.28
COL25A1-201ENST00000399126 POLR3CQ9BUI4 534 aaPredicted RBP16.83■□□□□ 0.28
COL25A1-201ENST00000399126 RUSC1Q9BVN2 902 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 R3HDMLQ9H3Y0 253 aa16.83■□□□□ 0.28
COL25A1-201ENST00000399126 A1CFQ9NQ94 594 aaKnown RBP16.83■□□□□ 0.28
COL25A1-201ENST00000399126 DOCK5Q9H7D0 1870 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 TRAF5O00463 557 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 DHX15O43143 795 aaKnown RBP16.82■□□□□ 0.28
COL25A1-201ENST00000399126 ATP9AO75110 1047 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 SKILP12757 684 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 CCNE1P24864 410 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 ARHGEF16Q5VV41 709 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 BANK1Q8NDB2 785 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 ZHX3Q9H4I2 956 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 HOXC10Q9NYD6 342 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 BTBD7Q9P203 1132 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 SCN4AP35499 1836 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 RSPH10B2B2RC85 870 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 RSPH10BP0C881 870 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 OAZ1P54368 228 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 MTMR1Q13613 665 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 ANKRD13AQ8IZ07 590 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 CSGALNACT2Q8N6G5 542 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 ZC3H15Q8WU90 426 aaKnown RBP16.82■□□□□ 0.28
COL25A1-201ENST00000399126 REEP2Q9BRK0 252 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 TEKT3Q9BXF9 490 aa16.82■□□□□ 0.28
COL25A1-201ENST00000399126 AGO4Q9HCK5 861 aaKnown RBP16.82■□□□□ 0.28
COL25A1-201ENST00000399126 LOC285556D6RIA3 1793 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 TESPA1A2RU30 521 aaPredicted RBP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 KRT18P05783 430 aaKnown RBP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 GSDMDP57764 484 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 MAP1SQ66K74 1059 aaPredicted RBP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 SYT2Q8N9I0 419 aaPredicted RBP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 LRRC27Q9C0I9 530 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 JADE2Q9NQC1 790 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 CYP39A1Q9NYL5 469 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 LIMA1Q9UHB6 759 aaKnown RBP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 SFPQP23246 707 aaKnown RBP eCLIP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 NF2P35240 595 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 COPB1P53618 953 aaKnown RBP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 SEMA3FQ13275 785 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 FAM26FQ5R3K3 315 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 ZNF408Q9H9D4 720 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 BMP2KQ9NSY1 1161 aaPredicted RBP16.81■□□□□ 0.28
COL25A1-201ENST00000399126 RABGAP1Q9Y3P9 1069 aa16.81■□□□□ 0.28
COL25A1-201ENST00000399126 PCDHA2Q9Y5H9 948 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms