RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 PTGDRQ13258 359 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 PTPAQ15257 358 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 IL17AQ16552 155 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 LRCH2Q5VUJ6 765 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 RNF180Q86T96 592 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 TRIM50Q86XT4 487 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ANKLE1Q8NAG6 615 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 ARRDC4Q8NCT1 418 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 KAT2BQ92831 832 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 FAM20AQ96MK3 541 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 SDF4Q9BRK5 362 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 C16orf70Q9BSU1 422 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 TBC1D22BQ9NU19 505 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 CLIC4Q9Y696 253 aa14.03□□□□□ -0.16
HLA-DQB1-203ENST00000399082 GRIN2DO15399 1336 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ELP1O95163 1332 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 IGKV6D-21A0A0A0MT36 114 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 GAS7O60861 476 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 OR52Z1P0C646 297 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ZNF286BP0CG31 522 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ATP2C1P98194 919 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 KRT76Q01546 638 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PPP2R5CQ13362 524 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SF3A1Q15459 793 aaKnown RBP14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ZNF746Q6NUN9 644 aaPredicted RBP14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CXCL17Q6UXB2 119 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SEPT1Q8WYJ6 367 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TSEN34Q9BSV6 310 aaKnown RBP14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TEKT3Q9BXF9 490 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SPC25Q9HBM1 224 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SSUH2Q9Y2M2 353 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MKI67P46013 3256 aaKnown RBP14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ALPK3Q96L96 1907 aa14.02□□□□□ -0.17
HLA-DQB1-203ENST00000399082 EMSYQ7Z589 1322 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 A0A1W2PQ45 241 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 A0A1W2PQY0 241 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MOXD2PA6NHM9 499 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 KBTBD13C9JR72 458 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CHMP2AO43633 222 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 LGR5O75473 907 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 F2P00734 622 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 LGALS2P05162 132 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SUPT20HL2P0C7V6 817 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TCF7P36402 384 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TXKP42681 527 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 FOXD4L6Q3SYB3 417 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 FOXD4L3Q6VB84 417 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SLFN12Q8IYM2 578 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PPP1R13LQ8WUF5 828 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 FERMT2Q96AC1 680 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PAWRQ96IZ0 340 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 IPO9Q96P70 1041 aaKnown RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TTC12Q9H892 705 aaPredicted RBP14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 DNAH12Q6ZR08 3092 aa14.01□□□□□ -0.17
HLA-DQB1-203ENST00000399082 POTEMA6NI47 508 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 HAS3O00219 553 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 NOP56O00567 594 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PPFIA4O75335 1185 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MYL3P08590 195 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CAPN2P17655 700 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ATP4AP20648 1035 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 NASPP49321 788 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PSMC6P62333 389 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 GRIN1Q05586 938 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 UGCGQ16739 394 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 DGKDQ16760 1214 aa14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PCSK9Q8NBP7 692 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SPDYE1Q8NFV5 336 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TFIP11Q9UBB9 837 aaKnown RBP14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 DAXXQ9UER7 740 aaPredicted RBP14□□□□□ -0.17
HLA-DQB1-203ENST00000399082 IGSF9BQ9UPX0 1349 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 WDR64B1ANS9 1081 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ZNF862O60290 1169 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 BAG4O95429 457 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PRPHP41219 470 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CEBPZQ03701 1054 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 DNM1Q05193 864 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 HIC1Q14526 733 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SMAP1Q8IYB5 467 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 MTG1Q9BT17 334 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 C11orf49Q9H6J7 331 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 DISC1Q9NRI5 854 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 POLR3EQ9NVU0 708 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 WRAP73Q9P2S5 460 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PCDHA12Q9UN75 941 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TCHHQ07283 1943 aa13.99□□□□□ -0.17
HLA-DQB1-203ENST00000399082 LAD1O00515 517 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 ZEB2O60315 1214 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 KPNA6O60684 536 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 TECP42680 631 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 PSEN2P49810 448 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 JAK3P52333 1124 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 NUCB2P80303 420 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 SNX17Q15036 470 aa13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 BRDTQ58F21 947 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQB1-203ENST00000399082 NCAPH2Q6IBW4 605 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms