RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 CCDC43Q96MW1 224 aaKnown RBP21.5■■□□□ 1.03
COL13A1-205ENST00000398978 COL24A1Q17RW2 1714 aa21.5■■□□□ 1.03
COL13A1-205ENST00000398978 AHDC1Q5TGY3 1603 aaPredicted RBP21.5■■□□□ 1.03
COL13A1-205ENST00000398978 PPFIA4O75335 1185 aa21.5■■□□□ 1.03
COL13A1-205ENST00000398978 RUFY1Q96T51 708 aa21.5■■□□□ 1.03
COL13A1-205ENST00000398978 ATP6V0A2Q9Y487 856 aa21.5■■□□□ 1.03
COL13A1-205ENST00000398978 GAKO14976 1311 aa21.5■■□□□ 1.03
COL13A1-205ENST00000398978 SERPING1P05155 500 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 SMARCA1P28370 1054 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 SHMT1P34896 483 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 CYP4A11Q02928 519 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 KCNH2Q12809 1159 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 CFAP221Q4G0U5 840 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 P2RX7Q99572 595 aaKnown RBP21.49■■□□□ 1.03
COL13A1-205ENST00000398978 SNHG28P0DPA3 235 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 CYP11B2P19099 503 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 CLK2P49760 499 aaKnown RBP21.49■■□□□ 1.03
COL13A1-205ENST00000398978 PDCLQ13371 301 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 ARSHQ5FYA8 562 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 PCDHA2Q9Y5H9 948 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 PRLRP16471 622 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 MRPL12P52815 198 aaKnown RBP21.49■■□□□ 1.03
COL13A1-205ENST00000398978 EPHB4P54760 987 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 USH1GQ495M9 461 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 PRR16Q569H4 304 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 DCAF17Q5H9S7 520 aaPredicted RBP21.49■■□□□ 1.03
COL13A1-205ENST00000398978 PPP4R3AQ6IN85 833 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 CAPS2Q9BXY5 557 aa21.49■■□□□ 1.03
COL13A1-205ENST00000398978 SFI1A8K8P3 1242 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 RSPH10B2B2RC85 870 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 ZBTB5O15062 677 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 RSPH10BP0C881 870 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 NR2F2P24468 414 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 NOVP48745 357 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 PSMD2Q13200 908 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 QRICH1Q2TAL8 776 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 GJB7Q6PEY0 223 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 TRIM59Q8IWR1 403 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 PCDHA1Q9Y5I3 950 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 SSU72P8A0A1W2PR75 194 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 NOP2P46087 812 aaKnown RBP21.48■■□□□ 1.03
COL13A1-205ENST00000398978 TCERG1LQ5VWI1 586 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 CCDC65Q8IXS2 484 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 BCAS4Q8TDM0 211 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 KCNQ5Q9NR82 932 aa21.48■■□□□ 1.03
COL13A1-205ENST00000398978 KCNA1Q09470 495 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 KCTD10Q9H3F6 313 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 BTAF1O14981 1849 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 GRID2IPA4D2P6 1211 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 HSF2BPO75031 334 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 PTK2Q05397 1052 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 ASIC2Q16515 512 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 CASKIN2Q8WXE0 1202 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 IGKV6D-41A0A0C4DH26 115 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 KCNK3O14649 394 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 CLIC2O15247 247 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 ZEB2O60315 1214 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 NAB2Q15742 525 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 SLC18A3Q16572 532 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 ZNF572Q7Z3I7 529 aaPredicted RBP21.47■■□□□ 1.03
COL13A1-205ENST00000398978 PROM2Q8N271 834 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 IQCDQ96DY2 449 aa21.47■■□□□ 1.03
COL13A1-205ENST00000398978 RBM17Q96I25 401 aaKnown RBP21.47■■□□□ 1.03
COL13A1-205ENST00000398978 AJAP1Q9UKB5 411 aaPredicted RBP21.47■■□□□ 1.03
COL13A1-205ENST00000398978 MYBP10242 640 aa21.46■■□□□ 1.03
COL13A1-205ENST00000398978 NT5C2P49902 561 aa21.46■■□□□ 1.03
COL13A1-205ENST00000398978 ORC2Q13416 577 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-205ENST00000398978 DDX42Q86XP3 938 aaKnown RBP eCLIP21.46■■□□□ 1.03
COL13A1-205ENST00000398978 SLF2Q8IX21 1173 aa21.46■■□□□ 1.03
COL13A1-205ENST00000398978 FAM163AQ96GL9 167 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-205ENST00000398978 AP1M1Q9BXS5 423 aa21.46■■□□□ 1.03
COL13A1-205ENST00000398978 ZNF571Q7Z3V5 609 aaPredicted RBP21.46■■□□□ 1.03
COL13A1-205ENST00000398978 SFR1Q86XK3 245 aa21.46■■□□□ 1.03
COL13A1-205ENST00000398978 CENPHQ9H3R5 247 aa21.46■■□□□ 1.03
COL13A1-205ENST00000398978 HDAC9Q9UKV0 1011 aa21.46■■□□□ 1.03
COL13A1-205ENST00000398978 ABCB11O95342 1321 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 RAD51CO43502 376 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 GYS1P13807 737 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 CASP4P49662 377 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 C15orf52Q6ZUT6 534 aaKnown RBP21.45■■□□□ 1.02
COL13A1-205ENST00000398978 PACS2Q86VP3 889 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 CATSPER3Q86XQ3 398 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 CYP2W1Q8TAV3 490 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 ANO3Q9BYT9 981 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 LRRC27Q9C0I9 530 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 TULP1O00294 542 aaPredicted RBP21.45■■□□□ 1.02
COL13A1-205ENST00000398978 SPAG5Q96R06 1193 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 GANQ9H2C0 597 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 GRIN2DO15399 1336 aa21.45■■□□□ 1.02
COL13A1-205ENST00000398978 hCG_1984214I3L0E3 225 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 ZNF713Q8N859 430 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-205ENST00000398978 TSPYL1Q9H0U9 437 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 POLD1P28340 1107 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 PPFIA1Q13136 1202 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 NNTQ13423 1086 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 CDC42EP5Q6NZY7 148 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 RNF10Q8N5U6 811 aaKnown RBP21.44■■□□□ 1.02
COL13A1-205ENST00000398978 ZNF233A6NK53 670 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 RBAK-RBAKDNI3L0D1 243 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 CETN3O15182 167 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms