RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 POC1B-GALNT4F8VUJ3 575 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 N4BP1O75113 896 aaKnown RBP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 IREB2P48200 963 aaKnown RBP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 TUBB2AQ13885 445 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 TFDP1Q14186 410 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 TBC1D10CQ8IV04 446 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 MRFAP1L1Q96HT8 127 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 TUBB2BQ9BVA1 445 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 CALN1Q9BXU9 219 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 IL25Q9H293 177 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 SMYD2Q9NRG4 433 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 GDAQ9Y2T3 454 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 DLG5Q8TDM6 1919 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 LIFRP42702 1097 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 TAOK1Q7L7X3 1001 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 MYLK4Q86YV6 388 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 RTKN2Q8IZC4 609 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 RETREG2Q8NC44 543 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 RMDN3Q96TC7 470 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 UBE2TQ9NPD8 197 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 SPTLC3Q9NUV7 552 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 YWHAGP61981 247 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 MRPS25P82663 173 aaKnown RBP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 RBL2Q08999 1139 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 SCARF1Q14162 830 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 I3L4J1 428 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 GCFC2P16383 781 aaKnown RBP12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 IFNAR2P48551 515 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 CYP4F22Q6NT55 531 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 RNF207Q6ZRF8 634 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 ATP2A3Q93084 1043 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 ADAMTS1Q9UHI8 967 aa12.54□□□□□ -0.4
PCDHGA8-201ENST00000398604 FTCDO95954 541 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 TCP1P17987 556 aaKnown RBP12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 PPFIA1Q13136 1202 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 ARID5BQ14865 1188 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 TTC19Q6DKK2 380 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 RYBPQ8N488 228 aaPredicted RBP12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 SH2D3AQ9BRG2 576 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 PARVGQ9HBI0 331 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 MAN1B1Q9UKM7 699 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 PRPF3O43395 683 aaKnown RBP12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 PPP6R2O75170 966 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 MXI1P50539 228 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 MFAP3P55082 362 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 ACRBPQ8NEB7 543 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 A6NJR5 290 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 NFIXQ14938 502 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 NXNQ6DKJ4 435 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 RSPH3Q86UC2 560 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 DGKHQ86XP1 1220 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 PPP4R1Q8TF05 950 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 LRFN2Q9ULH4 789 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 POLIQ9UNA4 740 aa12.53□□□□□ -0.4
PCDHGA8-201ENST00000398604 NBPF26B4DH59 902 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 CHGBP05060 677 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 GSTA1P08263 222 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 GSTA2P09210 222 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 GPSM2P81274 684 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 NBPF10Q6P3W6 841 aaKnown RBP12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 TMED8Q6PL24 325 aaPredicted RBP12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 TMEM179Q6ZVK1 233 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 NBPF15Q8N660 670 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 MAIP1Q8WWC4 291 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 ACCSQ96QU6 501 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 ISCA1Q9BUE6 129 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 RNF181Q9P0P0 153 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 PNMA2Q9UL42 364 aa12.52□□□□□ -0.4
PCDHGA8-201ENST00000398604 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 ZSCAN20P17040 1043 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 MIS18BP1Q6P0N0 1132 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 CEP128Q6ZU80 1094 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 SCYL1Q96KG9 808 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 DCP1AQ9NPI6 582 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 CIB2O75838 187 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 AFPP02771 609 aaKnown RBP12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 MAPK4P31152 587 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 INPP5BP32019 993 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 SARNPP82979 210 aaKnown RBP12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 AK8Q96MA6 479 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 SNX25Q9H3E2 840 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 GCNT4Q9P109 453 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 MKRN1Q9UHC7 482 aaKnown RBP12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 VIRMAQ69YN4 1812 aaKnown RBP12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 TXNDC9O14530 226 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 ECE2O60344 883 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 RESTQ13127 1097 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 OTUD5Q96G74 571 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 ANKRD36BP1Q96IX9 119 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 CDHR1Q96JP9 859 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 CCDC68Q9H2F9 335 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 LRRC4Q9HBW1 653 aa12.52□□□□□ -0.41
PCDHGA8-201ENST00000398604 STK38LQ9Y2H1 464 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms