RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 LRRC27Q9C0I9 530 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 STX8Q9UNK0 236 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 LEMD3Q9Y2U8 911 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 ARID5AQ03989 594 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 MTMR3Q13615 1198 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 BYSLQ13895 437 aaKnown RBP19.01■□□□□ 0.63
EWSR1-206ENST00000397938 TMEM266Q2M3C6 531 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 SOGA3Q5TF21 947 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 PARP9Q8IXQ6 854 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 CNOT8Q9UFF9 292 aaKnown RBP19.01■□□□□ 0.63
EWSR1-206ENST00000397938 FBXL5Q9UKA1 691 aa19.01■□□□□ 0.63
EWSR1-206ENST00000397938 KIF1CO43896 1103 aaKnown RBP19■□□□□ 0.63
EWSR1-206ENST00000397938 PSEN1P49768 467 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 TMEM119Q4V9L6 283 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 ARMC9Q7Z3E5 817 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 KCNK18Q7Z418 384 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 TRIM59Q8IWR1 403 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 SGSM3Q96HU1 749 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 CEP63Q96MT8 703 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 GANQ9H2C0 597 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 CEP104O60308 925 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 ELF1P32519 619 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 MARSP56192 900 aaKnown RBP19■□□□□ 0.63
EWSR1-206ENST00000397938 COASYQ13057 564 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 LACTB2Q53H82 288 aaPredicted RBP19■□□□□ 0.63
EWSR1-206ENST00000397938 CACNA2D3Q8IZS8 1091 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 REXO1Q8N1G1 1221 aaKnown RBP19■□□□□ 0.63
EWSR1-206ENST00000397938 SNX29Q8TEQ0 813 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 RAPGEF5Q92565 580 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 NUDT12Q9BQG2 462 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 BCCIPQ9P287 314 aaKnown RBP eCLIP19■□□□□ 0.63
EWSR1-206ENST00000397938 BIN2Q9UBW5 565 aaPredicted RBP19■□□□□ 0.63
EWSR1-206ENST00000397938 CEP83Q9Y592 693 aa19■□□□□ 0.63
EWSR1-206ENST00000397938 POTEMA6NI47 508 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 PGRMC1O00264 195 aaKnown RBP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 SART1O43290 800 aaKnown RBP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 ZBTB48P10074 688 aaPredicted RBP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 SF3B3Q15393 1217 aaKnown RBP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 C10orf76Q5T2E6 689 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 CCDC50Q8IVM0 306 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 UBLCP1Q8WVY7 318 aaPredicted RBP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 TATDN2Q93075 761 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 HAUS2Q9NVX0 235 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 SLC37A4O43826 429 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 GNA14O95837 355 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 PPARDQ03181 441 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 ENOX2Q16206 610 aaKnown RBP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 ODF2Q5BJF6 829 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 LRRC57Q8N9N7 239 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 MAGEC3Q8TD91 643 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 DNAJC19Q96DA6 116 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 RAB34Q9BZG1 259 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 TMEM260Q9NX78 707 aa18.99■□□□□ 0.63
EWSR1-206ENST00000397938 NOC2LQ9Y3T9 749 aaKnown RBP18.99■□□□□ 0.63
EWSR1-206ENST00000397938 FLT3P36888 993 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 FAM228AQ86W67 206 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 ZNF444Q8N0Y2 327 aaPredicted RBP18.98■□□□□ 0.63
EWSR1-206ENST00000397938 AP1M1Q9BXS5 423 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 SUFUQ9UMX1 484 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 NOVA2Q9UNW9 492 aaKnown RBP18.98■□□□□ 0.63
EWSR1-206ENST00000397938 ESYT2A0FGR8 921 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 TMCO5BA8MYB1 307 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 CCDC188H7C350 402 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 PDHBP11177 359 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 HIBADHP31937 336 aaKnown RBP18.98■□□□□ 0.63
EWSR1-206ENST00000397938 NF2P35240 595 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 SCTRP47872 440 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 PDIA5Q14554 519 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 IFI16Q16666 785 aaKnown RBP18.98■□□□□ 0.63
EWSR1-206ENST00000397938 FAM26FQ5R3K3 315 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 KRT79Q5XKE5 535 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 SLC44A5Q8NCS7 719 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 P3H4Q92791 437 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.635e-8■■□□□ 12.1
EWSR1-206ENST00000397938 DDX47Q9H0S4 455 aaKnown RBP18.98■□□□□ 0.63
EWSR1-206ENST00000397938 GOLPH3Q9H4A6 298 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 DOT1LQ8TEK3 1739 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 KIF13BQ9NQT8 1826 aa18.98■□□□□ 0.63
EWSR1-206ENST00000397938 ERFEQ4G0M1 354 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 TMC3Q7Z5M5 1100 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 DZIP1Q86YF9 867 aaKnown RBP18.97■□□□□ 0.63
EWSR1-206ENST00000397938 CELF1Q92879 486 aaKnown RBP18.97■□□□□ 0.63
EWSR1-206ENST00000397938 TFCP2L1Q9NZI6 479 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 SEC63Q9UGP8 760 aaKnown RBP18.97■□□□□ 0.63
EWSR1-206ENST00000397938 ODF2LQ9ULJ1 636 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 TPX2Q9ULW0 747 aaKnown RBP18.97■□□□□ 0.63
EWSR1-206ENST00000397938 MYH7BA7E2Y1 1941 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 NAV1Q8NEY1 1877 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 TDP2O95551 362 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 PTK2Q05397 1052 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 XRCC4Q13426 336 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 SEPT2Q15019 361 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 TAX1BP1Q86VP1 789 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 METTL13Q8N6R0 699 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 KANSL2Q9H9L4 492 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 XIRP1Q702N8 1843 aaKnown RBP18.97■□□□□ 0.63
EWSR1-206ENST00000397938 DCDC2CA8MYV0 355 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 BACH1O14867 736 aa18.97■□□□□ 0.63
EWSR1-206ENST00000397938 MAGOHP61326 146 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms