RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 GNPTABQ3T906 1256 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 B3GNT9Q6UX72 402 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 NECAB2Q7Z6G3 386 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 DPP9Q86TI2 863 aa19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 DDX19AQ9NUU7 478 aaKnown RBP19.06■□□□□ 0.64
TSPAN4-205ENST00000397406 SPATA31C2B4DYI2 1134 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 GAS7O60861 476 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 ATP9AO75110 1047 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 ZNF202O95125 648 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 PPP2R5CQ13362 524 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 CHRDL2Q6WN34 429 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 CABP7Q86V35 215 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 MAML3Q96JK9 1138 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 CDHR1Q96JP9 859 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 CEP290O15078 2479 aa19.05■□□□□ 0.64
TSPAN4-205ENST00000397406 POLR2DO15514 142 aaKnown RBP19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 KCNA2P16389 499 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 TXLNAP40222 546 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 UBA7P41226 1012 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 FXR1P51114 621 aaKnown RBP eCLIP19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 PRAMEF19Q5SWL8 479 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 MFSD14CQ5VZR4 134 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 OLFML2BQ68BL8 750 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 MAMDC4Q6UXC1 1216 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 ARMCX2Q7L311 632 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 TEKT3Q9BXF9 490 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 CLSTN2Q9H4D0 955 aa19.04■□□□□ 0.64
TSPAN4-205ENST00000397406 KARSQ15046 597 aaKnown RBP19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 CCDC183Q5T5S1 534 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 NCAPH2Q6IBW4 605 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 PDILTQ8N807 584 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 SYAP1Q96A49 352 aaPredicted RBP19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 TIGD1Q96MW7 591 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 PANK2Q9BZ23 570 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 UNC45AQ9H3U1 944 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 C11orf49Q9H6J7 331 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 TBC1D22BQ9NU19 505 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 SLC5A4Q9NY91 659 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 PKD2L1Q9P0L9 805 aa19.03■□□□□ 0.64
TSPAN4-205ENST00000397406 EML1O00423 815 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 KINO60870 393 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 E2F4Q16254 413 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 LONRF3Q496Y0 759 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 SEPT14Q6ZU15 432 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 SNX29Q8TEQ0 813 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 NUP62CLQ9H1M0 184 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 DISC1Q9NRI5 854 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 DDX20Q9UHI6 824 aaKnown RBP19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 NFASCO94856 1347 aa19.02■□□□□ 0.64
TSPAN4-205ENST00000397406 ACTN4O43707 911 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 EVI5O60447 810 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 HYIQ5T013 277 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 KRT79Q5XKE5 535 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 KRBA2Q6ZNG9 492 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 EEPD1Q7L9B9 569 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 FBXO16Q8IX29 292 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 MSL3Q8N5Y2 521 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 DHX58Q96C10 678 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 PNMA5Q96PV4 448 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 PYM1Q9BRP8 204 aaKnown RBP19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 KATNBL1Q9H079 304 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 CCDC39Q9UFE4 941 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 SERTAD1Q9UHV2 236 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 SYNGAP1Q96PV0 1343 aa19.01■□□□□ 0.63
TSPAN4-205ENST00000397406 DDX39AO00148 427 aaKnown RBP19■□□□□ 0.63
TSPAN4-205ENST00000397406 SLC26A4O43511 780 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 SNAI1O95863 264 aaPredicted RBP19■□□□□ 0.63
TSPAN4-205ENST00000397406 SP2Q02086 613 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 GRB10Q13322 594 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 LRRC26Q2I0M4 334 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 LRRC15Q8TF66 581 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 SENP7Q9BQF6 1050 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 TINF2Q9BSI4 451 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 VTA1Q9NP79 307 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 USP25Q9UHP3 1055 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 STK24Q9Y6E0 443 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 LOXHD1Q8IVV2 1947 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 CHMP2AO43633 222 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 TGFB3P10600 412 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 PLCG1P19174 1290 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 ECM1Q16610 540 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 TMEM119Q4V9L6 283 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 NAALADL2Q58DX5 795 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 PDXDC2PQ6P474 469 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 KCNV1Q6PIU1 500 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 C7orf61Q8IZ16 206 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 IQUBQ8NA54 791 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 ERMNQ8TAM6 284 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 CALML4Q96GE6 196 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 SDF4Q9BRK5 362 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 BCAS3Q9H6U6 928 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 NR2E3Q9Y5X4 410 aa19■□□□□ 0.63
TSPAN4-205ENST00000397406 SZT2Q5T011 3432 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 MED24O75448 989 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 ARIH2O95376 493 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 CCNE2O96020 404 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 SLFN14P0C7P3 912 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 SPATA31C1P0DKV0 1188 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 UBA1P22314 1058 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms