RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 CYP4A11Q02928 519 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 GOLGA8FQ08AF8 430 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 GOLGA8DPQ0D2H9 430 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 DPCR1Q3MIW9 517 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 TBC1D1Q86TI0 1168 aaPredicted RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 NIM1KQ8IY84 436 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 SMYD3Q9H7B4 428 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 HSPA4LO95757 839 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 SOX5P35711 763 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 TCIRG1Q13488 830 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 FBXO18Q8NFZ0 1043 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 IRAK4Q9NWZ3 460 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 SLC4A7Q9Y6M7 1214 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 GFPT2O94808 682 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 CHGBP05060 677 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 PDIA3P30101 505 aaKnown RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 HOXA7P31268 230 aaPredicted RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 STAT2P52630 851 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 PDIK1LQ8N165 341 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 CDC26Q8NHZ8 85 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 TAF1BQ53T94 588 aaPredicted RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 TMCO5AQ8N6Q1 288 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 SLC39A14Q15043 492 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 BZW1Q7L1Q6 419 aaKnown RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 WDR75Q8IWA0 830 aaKnown RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 SMYD4Q8IYR2 804 aaPredicted RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 ICA1LQ8NDH6 482 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 ACRBPQ8NEB7 543 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 TMEM206Q9H813 350 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 MAN1B1Q9UKM7 699 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 APOBEC2Q9Y235 224 aaKnown RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 NDUFA10O95299 355 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 FGAP02671 866 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 PKP1Q13835 747 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 NEUROG2Q9H2A3 272 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 UBE2TQ9NPD8 197 aaPredicted RBP15.04■□□□□ -0
COL4A3-202ENST00000396578 STRIP2Q9ULQ0 834 aa15.04■□□□□ -0
COL4A3-202ENST00000396578 A0A0G2JND7 137 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 TJP3O95049 919 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 ELAC2Q9BQ52 826 aaKnown RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 PCDHA4Q9UN74 947 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 PCDHA5Q9Y5H7 936 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 CHUKO15111 745 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 GSPT1P15170 499 aaKnown RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 KRT39Q6A163 491 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 FRA10AC1Q70Z53 315 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 METTL23Q86XA0 190 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 HIPK4Q8NE63 616 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 CDCA7Q9BWT1 371 aaPredicted RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 CHL1O00533 1208 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 SLFN14P0C7P3 912 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 ACAD11Q709F0 780 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 PAGR1Q9BTK6 254 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 STOML1Q9UBI4 398 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 TOM1O60784 492 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 FOSP01100 380 aaPredicted RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 SERPINB2P05120 415 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 PRKG1Q13976 671 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 CAPRIN1Q14444 709 aaKnown RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 EPM2AIP1Q7L775 607 aaPredicted RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 COG4Q9H9E3 785 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 PLAAQ9Y263 795 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 GOLGA8SH3BPF8 625 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 TEDDM1Q5T9Z0 273 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 C1orf146Q5VVC0 180 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 ZNF577Q9BSK1 485 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 CCDC159P0C7I6 412 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 TRIP13Q15645 432 aaPredicted RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 PI4K2BQ8TCG2 481 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 FAM149B1Q96BN6 582 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 AP1M1Q9BXS5 423 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 THAP9Q9H5L6 903 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 KMT5AQ9NQR1 393 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 NFU1Q9UMS0 254 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 ATP8B3O60423 1300 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 TMPRSS15P98073 1019 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 TRIM60Q495X7 471 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 CCDC92Q53HC0 331 aaPredicted RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 DACH2Q96NX9 599 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 PPARGC1AQ9UBK2 798 aaKnown RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 ZFP69BQ9UJL9 534 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 AKT3Q9Y243 479 aa15.03■□□□□ -0
COL4A3-202ENST00000396578 DIS3Q9Y2L1 958 aaKnown RBP15.03■□□□□ -0
COL4A3-202ENST00000396578 TRAPPC8Q9Y2L5 1435 aa15.02■□□□□ -0
COL4A3-202ENST00000396578 PPP1R12AO14974 1030 aaPredicted RBP15.02■□□□□ -0
COL4A3-202ENST00000396578 PNMA6AP0CW24 399 aaPredicted RBP15.02■□□□□ -0
COL4A3-202ENST00000396578 USP6NLQ92738 828 aa15.02■□□□□ -0
COL4A3-202ENST00000396578 LRRC37BQ96QE4 947 aa15.02■□□□□ -0
COL4A3-202ENST00000396578 G3BP2Q9UN86 482 aaKnown RBP15.02■□□□□ -0
COL4A3-202ENST00000396578 BLMP54132 1417 aaPredicted RBP15.02■□□□□ -0
COL4A3-202ENST00000396578 FMNL1O95466 1100 aaPredicted RBP15.02■□□□□ -0
COL4A3-202ENST00000396578 OLFM3Q96PB7 478 aa15.02■□□□□ -0
COL4A3-202ENST00000396578 PCDHA1Q9Y5I3 950 aa15.02■□□□□ -0
COL4A3-202ENST00000396578 SERPINI2O75830 405 aa15.02■□□□□ -0
COL4A3-202ENST00000396578 EXOC8Q8IYI6 725 aa15.02■□□□□ -0
COL4A3-202ENST00000396578 FAM96AQ9H5X1 160 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 SYNGAP1Q96PV0 1343 aa15.02□□□□□ -0.01
COL4A3-202ENST00000396578 ARHGEF10O15013 1369 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms