RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 BIN2Q9UBW5 565 aaPredicted RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 TMEM88BA6NKF7 163 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 MAP2K2P36507 400 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 NOVP48745 357 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 SARSP49591 514 aaKnown RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 PPATQ06203 517 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 KCTD19Q17RG1 926 aaPredicted RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 GPATCH4Q5T3I0 446 aaKnown RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 SUGP1Q8IWZ8 645 aaKnown RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 HDAC7Q8WUI4 952 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 BRI3BPQ8WY22 251 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 PTPN18Q99952 460 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 GBP3Q9H0R5 595 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 TMEM260Q9NX78 707 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 TAB2Q9NYJ8 693 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 REXO2Q9Y3B8 237 aaKnown RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 RIPK3Q9Y572 518 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 DUSP10Q9Y6W6 482 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 GOLGA6CA6NDK9 693 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 PDE2AO00408 941 aaPredicted RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 EBAG9O00559 213 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 DEXIO95424 95 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 CFBP00751 764 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 GOLGA6DP0CG33 693 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 MATR3P43243 847 aaKnown RBP eCLIP11.39□□□□□ -0.599e-9■■■□□ 17.6
TUBB-208ENST00000396389 GNGT1P63211 74 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 WHAMMP3Q1A5X7 153 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 EARS2Q5JPH6 523 aaKnown RBP11.39□□□□□ -0.59
TUBB-208ENST00000396389 CCDC91Q7Z6B0 441 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 COG1Q8WTW3 980 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 DCAF4Q8WV16 495 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 GMCL1Q96IK5 515 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 CRACR2AQ9BSW2 395 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 GOLGA6AQ9NYA3 693 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 CAPN7Q9Y6W3 813 aa11.39□□□□□ -0.59
TUBB-208ENST00000396389 PES1O00541 588 aaKnown RBP11.38□□□□□ -0.59
TUBB-208ENST00000396389 CPP00450 1065 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 KRT9P35527 623 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 C2orf54Q08AI8 447 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 SNAPC2Q13487 334 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 SPRYD7Q5W111 196 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 KCTD16Q68DU8 428 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 RGMBQ6NW40 437 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 ANKRD20A12PQ8NF67 263 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 FAM76AQ8TAV0 307 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 PSMB7Q99436 277 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 WDR18Q9BV38 432 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 SELENOOQ9BVL4 669 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 BLZF1Q9H2G9 400 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 ACBD3Q9H3P7 528 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 CD248Q9HCU0 757 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 SMARCAL1Q9NZC9 954 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 TSKSQ9UJT2 592 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 PASKQ96RG2 1323 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 BTBD19C9JJ37 291 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 N4BP3O15049 544 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 ATP1A2P50993 1020 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 SLC7A5Q01650 507 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 DIS3L2Q8IYB7 885 aaKnown RBP11.38□□□□□ -0.59
TUBB-208ENST00000396389 ANKRD13CQ8N6S4 541 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 MTA3Q9BTC8 594 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 ASCC2Q9H1I8 757 aaPredicted RBP11.38□□□□□ -0.59
TUBB-208ENST00000396389 FBXO2Q9UK22 296 aaPredicted RBP11.38□□□□□ -0.59
TUBB-208ENST00000396389 CCPG1Q9ULG6 757 aa11.38□□□□□ -0.59
TUBB-208ENST00000396389 SMCO2A6NFE2 343 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 PDHXO00330 501 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 ZBTB5O15062 677 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 ACTN4O43707 911 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 PBX1P40424 430 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 GNAQP50148 359 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 NOL9Q5SY16 702 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 NSMFQ6X4W1 530 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 SH2D3CQ8N5H7 860 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 BANK1Q8NDB2 785 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 RNF26Q9BY78 433 aaPredicted RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 TXNRD2Q9NNW7 524 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 ABHD10Q9NUJ1 306 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 FAM237AA0A1B0GTK4 181 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 NFIBO00712 420 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 WDR46O15213 610 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 PRPF3O43395 683 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 AARSP49588 968 aaKnown RBP eCLIP11.37□□□□□ -0.59
TUBB-208ENST00000396389 PPIL2Q13356 520 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 PDCLQ13371 301 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 PFKFB3Q16875 520 aaPredicted RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 SNRNP48Q6IEG0 339 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 PIK3AP1Q6ZUJ8 805 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 PRPF38AQ8NAV1 312 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 ARL8AQ96BM9 186 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 CTNND2Q9UQB3 1225 aa11.37□□□□□ -0.59
TUBB-208ENST00000396389 LAMA2P24043 3122 aaKnown RBP11.37□□□□□ -0.59
TUBB-208ENST00000396389 A0A0G2JLL6 359 aaPredicted RBP11.36□□□□□ -0.59
TUBB-208ENST00000396389 IGF2BP3O00425 579 aaKnown RBP eCLIP11.36□□□□□ -0.593e-7■■■■□ 19.6
TUBB-208ENST00000396389 ZEB2O60315 1214 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms