RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 SYF2O95926 243 aaKnown RBP10.26□□□□□ -0.77
NDE1-201ENST00000396354 GNGT1P63211 74 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 UBXN2AP68543 259 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 ZBED6P86452 979 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 C8orf74Q6P047 294 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 MAEAQ7L5Y9 396 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
NDE1-201ENST00000396354 SRLQ86TD4 932 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 ADGRF4Q8IZF3 695 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 BCAS4Q8TDM0 211 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 ARL8AQ96BM9 186 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 MTMR8Q96EF0 704 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 LSM14BQ9BX40 385 aaKnown RBP10.26□□□□□ -0.77
NDE1-201ENST00000396354 AP1M1Q9BXS5 423 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 KIAA1024Q9UPX6 916 aa10.26□□□□□ -0.77
NDE1-201ENST00000396354 CHMP2AO43633 222 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 TRIM14Q14142 442 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 ECM1Q16610 540 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 DACT2Q5SW24 774 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 DDX42Q86XP3 938 aaKnown RBP eCLIP10.25□□□□□ -0.77
NDE1-201ENST00000396354 OR2W6PQ8NHA6 318 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 FAM76AQ8TAV0 307 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 ZNF507Q8TCN5 953 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 LARP4BQ92615 738 aaKnown RBP10.25□□□□□ -0.77
NDE1-201ENST00000396354 EPB41L5Q9HCM4 733 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 KBTBD4Q9NVX7 518 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 CHORDC1Q9UHD1 332 aaPredicted RBP10.25□□□□□ -0.77
NDE1-201ENST00000396354 RAB21Q9UL25 225 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 ITIH6Q6UXX5 1313 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 POTEB3A0JP26 581 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 POTECB2RU33 542 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 EIF3CLB5ME19 914 aaKnown RBP10.25□□□□□ -0.77
NDE1-201ENST00000396354 PAFAH1B1P43034 410 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 ZNF543Q08ER8 600 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 AOC3Q16853 763 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 MIIPQ5JXC2 388 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 KRT79Q5XKE5 535 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 POTEBQ6S5H4 581 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 SPATA4Q8NEY3 305 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 FAM71BQ8TC56 605 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 MASTLQ96GX5 879 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 EIF3CQ99613 913 aaKnown RBP10.25□□□□□ -0.77
NDE1-201ENST00000396354 DNAJC7Q99615 494 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 PKD2L1Q9P0L9 805 aa10.25□□□□□ -0.77
NDE1-201ENST00000396354 BICDL2A1A5D9 508 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 LRRC10BA6NIK2 292 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 YDJCA8MPS7 323 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 ATP8B1O43520 1251 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 RHOBTB3O94955 611 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 FAM153BP0C7A2 387 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 CARSP49589 748 aaKnown RBP10.24□□□□□ -0.77
NDE1-201ENST00000396354 KIAA0753Q2KHM9 967 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 FAM153CQ494X1 144 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 VWA3BQ502W6 1294 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 RDH13Q8NBN7 331 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 TSEN2Q8NCE0 465 aaKnown RBP10.24□□□□□ -0.77
NDE1-201ENST00000396354 ALS2CR12Q96Q35 445 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 OSBPL9Q96SU4 736 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.24□□□□□ -0.77
NDE1-201ENST00000396354 FAM153AQ9UHL3 310 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 ECE2O60344 883 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 PALMO75781 387 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 CLSTN1O94985 981 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 COPB2P35606 906 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 VAV2P52735 878 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 PABPC4Q13310 644 aaKnown RBP eCLIP10.24□□□□□ -0.778e-7■■■■■ 32.1
NDE1-201ENST00000396354 TMEM266Q2M3C6 531 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 SPICE1Q8N0Z3 855 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 UHMK1Q8TAS1 419 aaKnown RBP10.24□□□□□ -0.77
NDE1-201ENST00000396354 CCDC43Q96MW1 224 aaKnown RBP10.24□□□□□ -0.77
NDE1-201ENST00000396354 PNMA5Q96PV4 448 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 MTMR9Q96QG7 549 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 UBXN6Q9BZV1 441 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 THAP9Q9H5L6 903 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 PSMD14O00487 310 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 CLIC2O15247 247 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 GDF11O95390 407 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 GNA11P29992 359 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 CKAP4Q07065 602 aaKnown RBP10.24□□□□□ -0.77
NDE1-201ENST00000396354 GRB10Q13322 594 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 CNNM4Q6P4Q7 775 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 KCNV2Q8TDN2 545 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 TEKT1Q969V4 418 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 BLOC1S4Q9NUP1 217 aa10.24□□□□□ -0.77
NDE1-201ENST00000396354 POTEFA5A3E0 1075 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 H0YHG0 523 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 KCNK3O14649 394 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 TTLL1O95922 423 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 POTEIP0CG38 1075 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 AMPD3Q01432 767 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 GUCY1A3Q02108 690 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 RNF187Q5TA31 235 aaPredicted RBP10.23□□□□□ -0.77
NDE1-201ENST00000396354 GJB7Q6PEY0 223 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 POTEGQ6S5H5 508 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 POTEEQ6S8J3 1075 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.23□□□□□ -0.77
NDE1-201ENST00000396354 C7orf43Q8WVR3 580 aa10.23□□□□□ -0.77
NDE1-201ENST00000396354 SH2D3AQ9BRG2 576 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms