RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 PDIA4P13667 645 aaKnown RBP21.69■■□□□ 1.06
HOXA9-202ENST00000396345 ITGA7Q13683 1181 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 CALCRLQ16602 461 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 RILPL1Q5EBL4 403 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 SLFN12Q8IYM2 578 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 KAT2BQ92831 832 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 HAS1Q92839 578 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 C16orf70Q9BSU1 422 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 KATNAL1Q9BW62 490 aa21.69■■□□□ 1.06
HOXA9-202ENST00000396345 SCN10AQ9Y5Y9 1956 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 ARVCFO00192 962 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 ATG7O95352 703 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 F2P00734 622 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 PSEN2P49810 448 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 CHMP4BP1P59074 171 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 NBR1Q14596 966 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 SNX17Q15036 470 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 C1orf53Q5VUE5 145 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 GRIN2DO15399 1336 aa21.68■■□□□ 1.06
HOXA9-202ENST00000396345 H3BRB1 525 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 CHMP2AO43633 222 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 RTP1P59025 263 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 MFSD10Q14728 455 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 NBPF20Q3BBV1 942 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 MIS18BP1Q6P0N0 1132 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 ABHD15Q6UXT9 468 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 TRIM50Q86XT4 487 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 SMAP1Q8IYB5 467 aaPredicted RBP21.67■■□□□ 1.06
HOXA9-202ENST00000396345 SLC43A3Q8NBI5 491 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 SEZ6LQ9BYH1 1024 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 TMEM60Q9H2L4 133 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 UNC45AQ9H3U1 944 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 TUT1Q9H6E5 874 aaKnown RBP21.67■■□□□ 1.06
HOXA9-202ENST00000396345 AZI2Q9H6S1 392 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 ATP11BQ9Y2G3 1177 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 SAMM50Q9Y512 469 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 PCDHB6Q9Y5E3 794 aa21.67■■□□□ 1.06
HOXA9-202ENST00000396345 WDR64B1ANS9 1081 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 HAS3O00219 553 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 LGR5O75473 907 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 SUPT20HL2P0C7V6 817 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 CDK7P50613 346 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 RESTQ13127 1097 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 KIAA0753Q2KHM9 967 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 PRPF38BQ5VTL8 546 aaKnown RBP21.66■■□□□ 1.06
HOXA9-202ENST00000396345 DPF3Q92784 378 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 GLG1Q92896 1179 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 MTMR9Q96QG7 549 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 PCYT2Q99447 389 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 SMARCAD1Q9H4L7 1026 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 DISC1Q9NRI5 854 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 ZNF215Q9UL58 517 aaPredicted RBP21.66■■□□□ 1.06
HOXA9-202ENST00000396345 PCDHA10Q9Y5I2 948 aa21.66■■□□□ 1.06
HOXA9-202ENST00000396345 ALPK3Q96L96 1907 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 EMSYQ7Z589 1322 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 BACH1O14867 736 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 PSAPP07602 524 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 SFNP31947 248 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 ANP32AP39687 249 aaKnown RBP21.65■■□□□ 1.06
HOXA9-202ENST00000396345 JAK3P52333 1124 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 TRIM60Q495X7 471 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 NFRKBQ6P4R8 1299 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 B3GNT9Q6UX72 402 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 MIER3Q7Z3K6 550 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 PPP1R13LQ8WUF5 828 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 ZSCAN16Q9H4T2 348 aaPredicted RBP21.65■■□□□ 1.06
HOXA9-202ENST00000396345 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.65■■□□□ 1.06
HOXA9-202ENST00000396345 VAV3Q9UKW4 847 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 PCDHA12Q9UN75 941 aa21.65■■□□□ 1.06
HOXA9-202ENST00000396345 DNAH12Q6ZR08 3092 aa21.64■■□□□ 1.06
HOXA9-202ENST00000396345 MKI67P46013 3256 aaKnown RBP21.64■■□□□ 1.06
HOXA9-202ENST00000396345 MROH7Q68CQ1 1323 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 IGKV6D-21A0A0A0MT36 114 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 EVI5O60447 810 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 PQBP1O60828 265 aaKnown RBP21.64■■□□□ 1.05
HOXA9-202ENST00000396345 OR52Z1P0C646 297 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 TXKP42681 527 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 STAT5BP51692 787 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 PPP2R5CQ13362 524 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 FAM47CQ5HY64 1035 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 FAM160B1Q5W0V3 765 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 SWSAP1Q6NVH7 229 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 C7orf31Q8N865 590 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 RDM1Q8NG50 284 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 ZNF302Q9NR11 478 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 ERAP1Q9NZ08 941 aa21.64■■□□□ 1.05
HOXA9-202ENST00000396345 ZSCAN22P10073 491 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-202ENST00000396345 TLE2Q04725 743 aa21.63■■□□□ 1.05
HOXA9-202ENST00000396345 PTPN11Q06124 597 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-202ENST00000396345 PTGDRQ13258 359 aa21.63■■□□□ 1.05
HOXA9-202ENST00000396345 FOXD4L5Q5VV16 416 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-202ENST00000396345 PLPPR4Q7Z2D5 763 aa21.63■■□□□ 1.05
HOXA9-202ENST00000396345 ANKRD33Q7Z3H0 272 aa21.63■■□□□ 1.05
HOXA9-202ENST00000396345 CCDC60Q8IWA6 550 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-202ENST00000396345 C4orf32Q8N8J7 132 aa21.63■■□□□ 1.05
HOXA9-202ENST00000396345 FOXD4L4Q8WXT5 416 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-202ENST00000396345 TOX2Q96NM4 488 aa21.63■■□□□ 1.05
HOXA9-202ENST00000396345 TTC12Q9H892 705 aaPredicted RBP21.63■■□□□ 1.05
HOXA9-202ENST00000396345 DCDC2CA8MYV0 355 aa21.62■■□□□ 1.05
HOXA9-202ENST00000396345 SLC34A2O95436 690 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms