RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ZNF792Q3KQV3 632 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 ZNF658Q5TYW1 1059 aaPredicted RBP16.92■□□□□ 0.3
SCAF11-204ENST00000395454 DRC7Q8IY82 874 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 KCNMB3Q9NPA1 279 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 STK17AQ9UEE5 414 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 DDX25Q9UHL0 483 aaKnown RBP16.92■□□□□ 0.3
SCAF11-204ENST00000395454 GABRQQ9UN88 632 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 NFE2L3Q9Y4A8 694 aa16.92■□□□□ 0.3
SCAF11-204ENST00000395454 CBFA2T2O43439 604 aa16.91■□□□□ 0.3
SCAF11-204ENST00000395454 RPN1P04843 607 aaKnown RBP16.91■□□□□ 0.3
SCAF11-204ENST00000395454 HOXD10P28358 340 aa16.91■□□□□ 0.3
SCAF11-204ENST00000395454 FLT3LGP49771 235 aa16.91■□□□□ 0.3
SCAF11-204ENST00000395454 GSDMDP57764 484 aa16.91■□□□□ 0.3
SCAF11-204ENST00000395454 CNNM4Q6P4Q7 775 aa16.91■□□□□ 0.3
SCAF11-204ENST00000395454 PDCD2LQ9BRP1 358 aa16.91■□□□□ 0.3
SCAF11-204ENST00000395454 KLRC4O43908 158 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 CIITAP33076 1130 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 TXKP42681 527 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 ARHGAP4P98171 946 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 PGM5Q15124 567 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 SPATA1Q5VX52 437 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 NPLOC4Q8TAT6 608 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 FGD4Q96M96 766 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 APBA2Q99767 749 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 C7orf25Q9BPX7 421 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 BLZF1Q9H2G9 400 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 LRWD1Q9UFC0 647 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 MCM3APO60318 1980 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 TBX3O15119 743 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 RHOBTB3O94955 611 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 GNRH1P01148 92 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
SCAF11-204ENST00000395454 MYCLP12524 364 aaPredicted RBP16.9■□□□□ 0.3
SCAF11-204ENST00000395454 GRB10Q13322 594 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 Q4G0T1 1027 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 HYIQ5T013 277 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 CDKAL1Q5VV42 579 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 IL31RAQ8NI17 732 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 USP6NLQ92738 828 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 STAMQ92783 540 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 MAML3Q96JK9 1138 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 MPHOSPH6Q99547 160 aaKnown RBP16.9■□□□□ 0.3
SCAF11-204ENST00000395454 GTPBP4Q9BZE4 634 aaKnown RBP16.9■□□□□ 0.3
SCAF11-204ENST00000395454 SRRDQ9UH36 339 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 DIS3Q9Y2L1 958 aaKnown RBP16.9■□□□□ 0.3
SCAF11-204ENST00000395454 TRIM17Q9Y577 477 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 RPTORQ8N122 1335 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 SYNRGQ9UMZ2 1314 aa16.9■□□□□ 0.3
SCAF11-204ENST00000395454 OFD1O75665 1012 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 NR3C2P08235 984 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 CYP3A4P08684 503 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 HOXC6P09630 235 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 LBX1P52954 281 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 FRMPD4Q14CM0 1322 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 TMEM119Q4V9L6 283 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 CACTINQ8WUQ7 758 aaKnown RBP16.89■□□□□ 0.29
SCAF11-204ENST00000395454 CALML4Q96GE6 196 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 ZFP91Q96JP5 570 aaPredicted RBP16.89■□□□□ 0.29
SCAF11-204ENST00000395454 PNMA5Q96PV4 448 aa16.89■□□□□ 0.29
SCAF11-204ENST00000395454 CTCFP49711 727 aaPredicted RBP16.88■□□□□ 0.29
SCAF11-204ENST00000395454 COBLL1Q53SF7 1204 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 APTXQ7Z2E3 356 aaKnown RBP16.88■□□□□ 0.29
SCAF11-204ENST00000395454 LENG9Q96B70 501 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 IWS1Q96ST2 819 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 TRIM9Q9C026 710 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 BLOC1S4Q9NUP1 217 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 RWDD2AQ9UIY3 292 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 PYCARDQ9ULZ3 195 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 ASB14A6NK59 587 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 B4DLN1 442 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 CCND2P30279 289 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 ZNF76P36508 570 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 UBASH3AP57075 661 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 PDE4DQ08499 809 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 CCL14Q16627 93 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 PCNX4Q63HM2 1172 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 ZNF467Q7Z7K2 595 aaPredicted RBP16.88■□□□□ 0.29
SCAF11-204ENST00000395454 TRMT44Q8IYL2 757 aaKnown RBP16.88■□□□□ 0.29
SCAF11-204ENST00000395454 GIMAP8Q8ND71 665 aaPredicted RBP16.88■□□□□ 0.29
SCAF11-204ENST00000395454 RASSF8Q8NHQ8 419 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 ETNPPLQ8TBG4 499 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 RAET1EQ8TD07 263 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 INTS13Q9NVM9 706 aa16.88■□□□□ 0.29
SCAF11-204ENST00000395454 XRCC5P13010 732 aaKnown RBP16.87■□□□□ 0.29
SCAF11-204ENST00000395454 STXBP2Q15833 593 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 ARMCX2Q7L311 632 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 EEPD1Q7L9B9 569 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 OTOP1Q7RTM1 612 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 VSTM4Q8IW00 320 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 SLFN12Q8IYM2 578 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 TINF2Q9BSI4 451 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 FLRT1Q9NZU1 646 aa16.87■□□□□ 0.29
SCAF11-204ENST00000395454 POTEMA6NI47 508 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 MRPS9P82933 396 aaKnown RBP16.86■□□□□ 0.29
SCAF11-204ENST00000395454 AMPD3Q01432 767 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 LRMPQ12912 555 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 VSIG10LQ86VR7 867 aa16.86■□□□□ 0.29
SCAF11-204ENST00000395454 SMYD4Q8IYR2 804 aaPredicted RBP16.86■□□□□ 0.29
SCAF11-204ENST00000395454 ADSSL1Q8N142 457 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms