RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 GRB10Q13322 594 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 HYIQ5T013 277 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 ZNF658Q5TYW1 1059 aaPredicted RBP21.58■■□□□ 1.05
LMNB1-202ENST00000395354 ETNPPLQ8TBG4 499 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 STAMQ92783 540 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 CDK5RAP3Q96JB5 506 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 C7orf25Q9BPX7 421 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 PDCD2LQ9BRP1 358 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 HSD3B7Q9H2F3 369 aa21.58■■□□□ 1.05
LMNB1-202ENST00000395354 KDM3AQ9Y4C1 1321 aa21.58■■□□□ 1.04
LMNB1-202ENST00000395354 LCTP09848 1927 aa21.58■■□□□ 1.04
LMNB1-202ENST00000395354 PGM5Q15124 567 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 TMEM119Q4V9L6 283 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 SNX29Q8TEQ0 813 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 MAML3Q96JK9 1138 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 IWS1Q96ST2 819 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 LRRC27Q9C0I9 530 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 ZNF236Q9UL36 1845 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 FRMPD4Q14CM0 1322 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 CASP8AP2Q9UKL3 1982 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 B4DLN1 442 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 NR3C2P08235 984 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 XRCC5P13010 732 aaKnown RBP21.57■■□□□ 1.04
LMNB1-202ENST00000395354 MSNP26038 577 aaKnown RBP21.57■■□□□ 1.04
LMNB1-202ENST00000395354 LBX1P52954 281 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 ZNF467Q7Z7K2 595 aaPredicted RBP21.57■■□□□ 1.04
LMNB1-202ENST00000395354 DRC7Q8IY82 874 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 CCDC47Q96A33 483 aaKnown RBP21.57■■□□□ 1.04
LMNB1-202ENST00000395354 LENG9Q96B70 501 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 PNMA5Q96PV4 448 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 MPHOSPH6Q99547 160 aaKnown RBP21.57■■□□□ 1.04
LMNB1-202ENST00000395354 APBA2Q99767 749 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 NT5C3AQ9H0P0 336 aa21.57■■□□□ 1.04
LMNB1-202ENST00000395354 PLXNA1Q9UIW2 1896 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 POTEMA6NI47 508 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 ASB14A6NK59 587 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 PPP1R3GB7ZBB8 358 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 MYCLP12524 364 aaPredicted RBP21.56■■□□□ 1.04
LMNB1-202ENST00000395354 PRR16Q569H4 304 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 SV2BQ7L1I2 683 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 VSIG10LQ86VR7 867 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 IL31RAQ8NI17 732 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 LRRC15Q8TF66 581 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 PLIN2Q99541 437 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 TRIM17Q9Y577 477 aa21.56■■□□□ 1.04
LMNB1-202ENST00000395354 LOC102724159A0A0B4J2E5 919 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 FAM86B1E9PN63 330 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 CBFA2T2O43439 604 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 RHOBTB3O94955 611 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 FAM86B2P0C5J1 330 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 ZNF76P36508 570 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 FANCCQ00597 558 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 PWP2Q15269 919 aaKnown RBP21.55■■□□□ 1.04
LMNB1-202ENST00000395354 PCNX4Q63HM2 1172 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 CNNM4Q6P4Q7 775 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 OTOP1Q7RTM1 612 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 TRIM9Q9C026 710 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 BLOC1S4Q9NUP1 217 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 FANCLQ9NW38 375 aa21.55■■□□□ 1.04
LMNB1-202ENST00000395354 KLRC4O43908 158 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 EDNRBP24530 442 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 CCND2P30279 289 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 PRMT2P55345 433 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 PDE4DQ08499 809 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 IRF5Q13568 498 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 STXBP2Q15833 593 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 CCL14Q16627 93 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 SPATA1Q5VX52 437 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 XRRA1Q6P2D8 792 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 MAMDC4Q6UXC1 1216 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 SPC24Q8NBT2 197 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 LARP4BQ92615 738 aaKnown RBP21.54■■□□□ 1.04
LMNB1-202ENST00000395354 RAD54LQ92698 747 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 ZFP91Q96JP5 570 aaPredicted RBP21.54■■□□□ 1.04
LMNB1-202ENST00000395354 TINF2Q9BSI4 451 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.54■■□□□ 1.04
LMNB1-202ENST00000395354 NFE2L3Q9Y4A8 694 aa21.54■■□□□ 1.04
LMNB1-202ENST00000395354 IGLV3-22A0A075B6J6 115 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 CD44P16070 742 aaKnown RBP21.53■■□□□ 1.04
LMNB1-202ENST00000395354 ZNF18P17022 549 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 PPP1R2P41236 205 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 OLFML2BQ68BL8 750 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 HAUS3Q68CZ6 603 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 MSL3Q8N5Y2 521 aaKnown RBP21.53■■□□□ 1.04
LMNB1-202ENST00000395354 KCTD17Q8N5Z5 321 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 RAET1EQ8TD07 263 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 MORC4Q8TE76 937 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 FLRT1Q9NZU1 646 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 RWDD2AQ9UIY3 292 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.53■■□□□ 1.04
LMNB1-202ENST00000395354 MRPS9P82933 396 aaKnown RBP21.53■■□□□ 1.04
LMNB1-202ENST00000395354 KMT5BQ4FZB7 885 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 ARMCX2Q7L311 632 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 ERMNQ8TAM6 284 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 MED15Q96RN5 788 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 RRAGDQ9NQL2 400 aaPredicted RBP21.53■■□□□ 1.04
LMNB1-202ENST00000395354 IFNKQ9P0W0 207 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 IMPACTQ9P2X3 320 aa21.53■■□□□ 1.04
LMNB1-202ENST00000395354 SYNRGQ9UMZ2 1314 aa21.52■■□□□ 1.04
LMNB1-202ENST00000395354 PVALEFA0A1B0GWK0 134 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms