RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 COL20A1Q9P218 1284 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 TMX2Q9Y320 296 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 SHTN1A0MZ66 631 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 DHX15O43143 795 aaKnown RBP11.38□□□□□ -0.59
HIF1A-203ENST00000394997 HOXA7P31268 230 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-203ENST00000394997 LRRC63Q05C16 580 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 MAPK7Q13164 816 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 NFIL3Q16649 462 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-203ENST00000394997 SRGAP1Q7Z6B7 1085 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 CREG2Q8IUH2 290 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 SYT2Q8N9I0 419 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-203ENST00000394997 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 GOLGA1Q92805 767 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 TDRD3Q9H7E2 651 aaKnown RBP11.38□□□□□ -0.59
HIF1A-203ENST00000394997 KANSL2Q9H9L4 492 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 NHEJ1Q9H9Q4 299 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-203ENST00000394997 CAPN6Q9Y6Q1 641 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 N4BP3O15049 544 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 TGFB1I1O43294 461 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 IVLP07476 585 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 ZBED6P86452 979 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 AP3B2Q13367 1082 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 CCDC70Q6NSX1 233 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 SLC30A10Q6XR72 485 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 RABGGTAQ92696 567 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 HDAC6Q9UBN7 1215 aa11.38□□□□□ -0.59
HIF1A-203ENST00000394997 FEZ2Q9UHY8 353 aaPredicted RBP11.38□□□□□ -0.59
HIF1A-203ENST00000394997 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 EZH2Q15910 746 aaKnown RBP11.37□□□□□ -0.59
HIF1A-203ENST00000394997 ARHGAP27Q6ZUM4 889 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 OTOP1Q7RTM1 612 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 CSGALNACT2Q8N6G5 542 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 FLAD1Q8NFF5 587 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 OR8K1Q8NGG5 319 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 CLEC4DQ8WXI8 215 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 SLC5A5Q92911 643 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 PSTPIP2Q9H939 334 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 PRR12Q9ULL5 1215 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 H3BQF6 201 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 GDF11O95390 407 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 RPA1P27694 616 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 PPP2R5CQ13362 524 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 DAW1Q8N136 415 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
HIF1A-203ENST00000394997 FAM107BQ9H098 131 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 ATP8B3O60423 1300 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 APBA3O96018 575 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 EGFRP00533 1210 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 HSD17B4P51659 736 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 ARHGAP4P98171 946 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 CERKLQ49MI3 558 aaPredicted RBP11.37□□□□□ -0.59
HIF1A-203ENST00000394997 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 POTEAQ6S8J7 498 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 SLF1Q9BQI6 1058 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 NDST4Q9H3R1 872 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 L1RE1Q9UN81 338 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 MTMR7Q9Y216 660 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 PFASO15067 1338 aa11.37□□□□□ -0.59
HIF1A-203ENST00000394997 KCNA1Q09470 495 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 IRF2BP2Q7Z5L9 587 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 GPR161Q8N6U8 529 aaKnown RBP11.36□□□□□ -0.59
HIF1A-203ENST00000394997 SEC63Q9UGP8 760 aaKnown RBP11.36□□□□□ -0.59
HIF1A-203ENST00000394997 SLITRK3O94933 977 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 CYP2C19P33261 490 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 TCP10Q12799 353 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 LRRC41Q15345 812 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 FKBP15Q5T1M5 1219 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 SLFN13Q68D06 897 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 C1orf186Q6ZWK4 172 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 KRT26Q7Z3Y9 468 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 RUSC1Q9BVN2 902 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 SH2D4AQ9H788 454 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 PDE11AQ9HCR9 933 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 POTEFA5A3E0 1075 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 MYBL2P10244 700 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 TXLNAP40222 546 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 RSBN1LQ6PCB5 846 aaPredicted RBP11.36□□□□□ -0.59
HIF1A-203ENST00000394997 POTEGQ6S5H5 508 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 TEX2Q8IWB9 1127 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 AMOTL1Q8IY63 956 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 GIMAP7Q8NHV1 300 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 LMO3Q8TAP4 145 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 SGIP1Q9BQI5 828 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 DMAC2Q9NW81 257 aa11.36□□□□□ -0.59
HIF1A-203ENST00000394997 RSPH10B2B2RC85 870 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 ZBTB39O15060 712 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 RSPH10BP0C881 870 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 PDXDC1Q6P996 788 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 SV2BQ7L1I2 683 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 CCDC170Q8IYT3 715 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 MMS19Q96T76 1030 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 POLR3CQ9BUI4 534 aaPredicted RBP11.35□□□□□ -0.59
HIF1A-203ENST00000394997 PSMA7O14818 248 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 NAP1L1P55209 391 aaKnown RBP11.35□□□□□ -0.59
HIF1A-203ENST00000394997 C1orf220Q5T0J3 134 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 FKBP1CQ5VVH2 108 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 SNX29Q8TEQ0 813 aa11.35□□□□□ -0.59
HIF1A-203ENST00000394997 HINFPQ9BQA5 517 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms