RNA–Protein interactions for RNA: ENST00000394989.6

SNCA-204, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,167 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-204ENST00000394989 HNRNPH3P31942 346 aaKnown RBP15.44■□□□□ 0.06
SNCA-204ENST00000394989 UBXN2AP68543 259 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 CDK17Q00537 523 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 MAP3K10Q02779 954 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 KCNMA1Q12791 1236 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 VPS33BQ9H267 617 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 RGL1Q9NZL6 768 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 CDC23Q9UJX2 597 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 DNM3Q9UQ16 869 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 FER1L6Q2WGJ9 1857 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 HOXD13P35453 343 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 ERMNQ8TAM6 284 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 EIF2AK1Q9BQI3 630 aaKnown RBP15.44■□□□□ 0.06
SNCA-204ENST00000394989 ATAD5Q96QE3 1844 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 ZNF76P36508 570 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 OTOP1Q7RTM1 612 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 ZC3H3Q8IXZ2 948 aaKnown RBP15.44■□□□□ 0.06
SNCA-204ENST00000394989 LACRTQ9GZZ8 138 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 HAUS4Q9H6D7 363 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 ARHGAP20Q9P2F6 1191 aa15.44■□□□□ 0.06
SNCA-204ENST00000394989 EIF3CLB5ME19 914 aaKnown RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 PLA2G6O60733 806 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 EGFRP00533 1210 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 KRT18P05783 430 aaKnown RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 AMPD2Q01433 879 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 CCDC170Q8IYT3 715 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 CHURC1Q8WUH1 139 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 BAP1Q92560 729 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 EIF3CQ99613 913 aaKnown RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 NAPGQ99747 312 aaPredicted RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 ZHX3Q9H4I2 956 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 MMRN2Q9H8L6 949 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 FAM53CQ9NYF3 392 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 RSPH10B2B2RC85 870 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 GCOM1H8Y6P7 765 aaPredicted RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 PSMD10O75832 226 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 RSPH10BP0C881 870 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 POLR2MP0CAP2 368 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 POLD1P28340 1107 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 MARSP56192 900 aaKnown RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 CYP27A1Q02318 531 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 ZNF662Q6ZS27 426 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 SMCR8Q8TEV9 937 aaPredicted RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 HSD17B14Q9BPX1 270 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 POLR3CQ9BUI4 534 aaPredicted RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 RUSC1Q9BVN2 902 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 BHMT2Q9H2M3 363 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 ZSWIM4Q9H7M6 989 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 POLD4Q9HCU8 107 aa15.43■□□□□ 0.06
SNCA-204ENST00000394989 ZNHIT6Q9NWK9 470 aaKnown RBP15.43■□□□□ 0.06
SNCA-204ENST00000394989 PHF20L1A8MW92 1017 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 TEX35Q5T0J7 233 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
SNCA-204ENST00000394989 EPM2AIP1Q7L775 607 aaPredicted RBP15.42■□□□□ 0.06
SNCA-204ENST00000394989 SRGAP1Q7Z6B7 1085 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 CEP63Q96MT8 703 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 MYOZ2Q9NPC6 264 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 DUSP10Q9Y6W6 482 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 LRRC53A6NM62 1247 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 KRT26Q7Z3Y9 468 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 SFR1Q86XK3 245 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 TRIM59Q8IWR1 403 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 IQCDQ96DY2 449 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 PUF60Q9UHX1 559 aaKnown RBP15.42■□□□□ 0.06
SNCA-204ENST00000394989 INPP5BP32019 993 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 CYLC1P35663 651 aaPredicted RBP15.42■□□□□ 0.06
SNCA-204ENST00000394989 KRT83P78385 493 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 SKIDA1Q1XH10 827 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 CCDC122Q5T0U0 273 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 LDHDQ86WU2 507 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 GPIHBP1Q8IV16 184 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 C10orf67Q8IYJ2 551 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 SLC5A5Q92911 643 aa15.42■□□□□ 0.06
SNCA-204ENST00000394989 ZNF536O15090 1300 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 ZBTB39O15060 712 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 NOL4O94818 638 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 SLITRK3O94933 977 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 PTGER2P43116 358 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 CTTNQ14247 550 aaKnown RBP15.41■□□□□ 0.06
SNCA-204ENST00000394989 CCDC40Q4G0X9 1142 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 GPR161Q8N6U8 529 aaKnown RBP15.41■□□□□ 0.06
SNCA-204ENST00000394989 PIGOQ8TEQ8 1089 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 TANGO6Q9C0B7 1094 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 ASNSP08243 561 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 MYBP10242 640 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 BAG6P46379 1132 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 CHMP4BP1P59074 171 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 TRAF1Q13077 416 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 DGKZQ13574 1117 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 TEX2Q8IWB9 1127 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 SLC16A10Q8TF71 515 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 AGBL1Q96MI9 1066 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 TEPSINQ96N21 525 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 FEM1BQ9UK73 627 aa15.41■□□□□ 0.06
SNCA-204ENST00000394989 ENC1O14682 589 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 CHMP2AO43633 222 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 ZRANB2O95218 330 aaKnown RBP eCLIP15.4■□□□□ 0.06
SNCA-204ENST00000394989 APBA1Q02410 837 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 PPP2R5CQ13362 524 aa15.4■□□□□ 0.06
SNCA-204ENST00000394989 ADAM9Q13443 819 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms