RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 TSHZ1Q6ZSZ6 1077 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZNF654Q8IZM8 581 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 FBXO22Q8NEZ5 403 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 NSUN3Q9H649 340 aaKnown RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 NOD1Q9Y239 953 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 LZTS1Q9Y250 596 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 ADGRA3Q8IWK6 1321 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 SMIM35A0A1B0GVV1 85 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 FUT2Q10981 343 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 CSPP1Q1MSJ5 1256 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 TMTC3Q6ZXV5 915 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 FAM178BQ8IXR5 827 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 CUL5Q93034 780 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 PIGSQ96S52 555 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 CDCA3Q99618 268 aaPredicted RBP7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 SMARCAD1Q9H4L7 1026 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 TOMM22Q9NS69 142 aa7.18□□□□□ -1.26
SMARCAD1-203ENST00000394961 GSTTP1A0A1W2PQM5 241 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 FSCN2O14926 492 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 EYA4O95677 639 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 COL9A1P20849 921 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 COASYQ13057 564 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 NPAS4Q8IUM7 802 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 AGXT2Q9BYV1 514 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 FTOQ9C0B1 505 aaKnown RBP eCLIP7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 RIC8AQ9NPQ8 531 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 ERAP1Q9NZ08 941 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 TCF20Q9UGU0 1960 aaKnown RBP7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZBBXA8MT70 800 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 CFBP00751 764 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 MCM5P33992 734 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 SLC4A3P48751 1232 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 EVCP57679 992 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 EXOSC10Q01780 885 aaKnown RBP7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 MARCH8Q5T0T0 291 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 DEFB128Q7Z7B8 93 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 RSPH3Q86UC2 560 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 IL27Q8NEV9 243 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 SEPT1Q8WYJ6 367 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZKSCAN3Q9BRR0 538 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 C1orf112Q9NSG2 853 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 PPME1Q9Y570 386 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 CNTNAP5Q8WYK1 1306 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 IFIT3O14879 490 aaKnown RBP7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 PTH1RQ03431 593 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 FAM47CQ5HY64 1035 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 TMEM192Q8IY95 271 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 LINC01465Q8N7H1 131 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 RASGRP4Q8TDF6 673 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 ATP6V0A1Q93050 837 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 RHOBTB2Q9BYZ6 727 aa7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 DDX49Q9Y6V7 483 aaKnown RBP7.17□□□□□ -1.26
SMARCAD1-203ENST00000394961 LCHNA4D1U4 455 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 DGKIO75912 1065 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZNF286BP0CG31 522 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 SREBF1P36956 1147 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 FAM189BP81408 668 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 EPC2Q52LR7 807 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 FBXO47Q5MNV8 452 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 RALYLQ86SE5 291 aaKnown RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 CTCFLQ8NI51 663 aaPredicted RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 LMBR1Q8WVP7 490 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 POP1Q99575 1024 aaKnown RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 C11orf84Q9BUA3 381 aaPredicted RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 TRAIPQ9BWF2 469 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 RNPEPQ9H4A4 650 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 C11orf16Q9NQ32 467 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 IGSF9BQ9UPX0 1349 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 CHRNA1P02708 482 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 ALADP13716 330 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 ATF7P17544 494 aaPredicted RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 CIITAP33076 1130 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 SMAD4Q13485 552 aaKnown RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 BMP2KLQ5H9B9 411 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 PRRX2Q99811 253 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 MXRA8Q9BRK3 442 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 MLXIPQ9HAP2 919 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 PLXNA3P51805 1871 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 BMPR1AP36894 532 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 MRPS6P82932 125 aaKnown RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 LPIN1Q14693 890 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 SMAD2Q15796 467 aaKnown RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 HERC4Q5GLZ8 1057 aaPredicted RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 ADHFE1Q8IWW8 467 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 IL17RAQ96F46 866 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 MSLNLQ96KJ4 702 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 STK39Q9UEW8 545 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 ISY1Q9ULR0 285 aaKnown RBP7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 TRPV2Q9Y5S1 764 aa7.16□□□□□ -1.26
SMARCAD1-203ENST00000394961 TREHO43280 583 aa7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 HMGB1P09429 215 aaKnown RBP7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 KCNC3Q14003 757 aa7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 ZNF484Q5JVG2 852 aa7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 TMEM31Q5JXX7 168 aa7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 SRBD1Q8N5C6 995 aaKnown RBP7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 DBF4BQ8NFT6 615 aa7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 RDM1Q8NG50 284 aa7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 PCYT2Q99447 389 aa7.15□□□□□ -1.26
SMARCAD1-203ENST00000394961 LRFN3Q9BTN0 628 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms