RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 MAN1B1Q9UKM7 699 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 POLIQ9UNA4 740 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 GOLGA8IPA6NC78 632 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 GOLGA8JA6NMD2 632 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 ASNSP08243 561 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 CACNB3P54284 484 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 DCAF4Q8WV16 495 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 TCP11Q8WWU5 503 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 ABCF3Q9NUQ8 709 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 BNIP3LO60238 219 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 RFC1P35251 1148 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-203ENST00000394872 FKBP3Q00688 224 aaKnown RBP11.24□□□□□ -0.61
COL4A6-203ENST00000394872 EFCAB13Q8IY85 973 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 SPDYE1Q8NFV5 336 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-203ENST00000394872 PLCG1P19174 1290 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 NFX1Q12986 1120 aaKnown RBP11.24□□□□□ -0.61
COL4A6-203ENST00000394872 GDAP1Q8TB36 358 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 SDCCAG3Q96C92 435 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 LRGUKQ96M69 825 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 EFCAB8A8MWE9 144 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 K7ERI5 159 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 STK25O00506 426 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 RPS6KA4O75676 772 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 GNAT1P11488 350 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 KIF23Q02241 960 aaPredicted RBP11.24□□□□□ -0.61
COL4A6-203ENST00000394872 PTPN12Q05209 780 aaKnown RBP11.24□□□□□ -0.61
COL4A6-203ENST00000394872 SLC12A1Q13621 1099 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 PKP1Q13835 747 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 CATSPER4Q7RTX7 472 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 SLITRK6Q9H5Y7 841 aa11.24□□□□□ -0.61
COL4A6-203ENST00000394872 ECE2O60344 883 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 SEPT2Q15019 361 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 FAM83BQ5T0W9 1011 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 MRFAP1L1Q96HT8 127 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 CDC25AP30304 524 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 MXI1P50539 228 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 TTC30AQ86WT1 665 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 DDX27Q96GQ7 796 aaKnown RBP11.23□□□□□ -0.61
COL4A6-203ENST00000394872 SYNMO15061 1565 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 IL1RL1Q01638 556 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 PHLDB3Q6NSJ2 640 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 THEM5Q8N1Q8 247 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 TACO1Q9BSH4 297 aaKnown RBP11.23□□□□□ -0.61
COL4A6-203ENST00000394872 CAPS2Q9BXY5 557 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 GABPB1Q06547 395 aaPredicted RBP11.23□□□□□ -0.61
COL4A6-203ENST00000394872 PSMD2Q13200 908 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 KRT33BQ14525 404 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 OR6B3Q8NGW1 331 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 MYL1P05976 194 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 PEX3P56589 373 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 BASP1P80723 227 aaKnown RBP11.23□□□□□ -0.61
COL4A6-203ENST00000394872 GOLGA8FQ08AF8 430 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 GOLGA8DPQ0D2H9 430 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 ARL13BQ3SXY8 428 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 GPT2Q8TD30 523 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 WRNIP1Q96S55 665 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 ZHX2Q9Y6X8 837 aa11.23□□□□□ -0.61
COL4A6-203ENST00000394872 MYO3BQ8WXR4 1341 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 ENC1O14682 589 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 STX1BP61266 288 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 COG7P83436 770 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 ALCAMQ13740 583 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 SLFN12LQ6IEE8 588 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 RAVER2Q9HCJ3 691 aaKnown RBP11.22□□□□□ -0.61
COL4A6-203ENST00000394872 HOXC10Q9NYD6 342 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 CDC42BPGQ6DT37 1551 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 ZNF18P17022 549 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 CIITAP33076 1130 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 JAK3P52333 1124 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 STXBP2Q15833 593 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 HLFQ16534 295 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 CLEC4GQ6UXB4 293 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 TTLL11Q8NHH1 800 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 SPZ1Q9BXG8 430 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 RRAGDQ9NQL2 400 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-203ENST00000394872 RWDD2AQ9UIY3 292 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 GOLGA8QA0A0J9YX86 632 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 GOLGA8OA6NCC3 632 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 GOLGA8NF8WBI6 632 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 C1orf228Q6PIY5 440 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 CFAP36Q96G28 342 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 FAM8A1Q9UBU6 413 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 AFF2P51816 1311 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 SASH1O94885 1247 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 ECEL1O95672 775 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 ELMOD1Q8N336 334 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 GIMAP8Q8ND71 665 aaPredicted RBP11.22□□□□□ -0.61
COL4A6-203ENST00000394872 CFAP61Q8NHU2 1237 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 FEM1BQ9UK73 627 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 INPP5FQ9Y2H2 1132 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 SART1O43290 800 aaKnown RBP11.22□□□□□ -0.61
COL4A6-203ENST00000394872 SERPINB6P35237 376 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 SOX5P35711 763 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 MSH2P43246 934 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 MTMR1Q13613 665 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 LLGL1Q15334 1064 aa11.22□□□□□ -0.61
COL4A6-203ENST00000394872 TDRD3Q9H7E2 651 aaKnown RBP11.22□□□□□ -0.61
COL4A6-203ENST00000394872 ZBTB7AO95365 584 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 TTC4O95801 387 aa11.21□□□□□ -0.61
COL4A6-203ENST00000394872 SLFN14P0C7P3 912 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms