RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CYP2J2P51589 502 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 HDLBPQ00341 1268 aaKnown RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 ZYXQ15942 572 aaKnown RBP14.48□□□□□ -0.09
NFKB1-202ENST00000394820 FAM26FQ5R3K3 315 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 PACSIN1Q9BY11 444 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 PANK4Q9NVE7 773 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 FLT1P17948 1338 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 E9PMD0 336 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 GCNT3O95395 438 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 SBK1Q52WX2 424 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 TRIM68Q6AZZ1 485 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 DDX12PQ92771 950 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 PCDHA12Q9UN75 941 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 CEP83Q9Y592 693 aa14.48□□□□□ -0.09
NFKB1-202ENST00000394820 TULP2O00295 520 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 GFPT2O94808 682 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 GLI1P08151 1106 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 LRRC14Q15048 493 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 SLC35G1Q2M3R5 365 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 CACNA2D3Q8IZS8 1091 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 TBC1D16Q8TBP0 767 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 MICAL1Q8TDZ2 1067 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 CELF4Q9BZC1 486 aaKnown RBP14.47□□□□□ -0.09
NFKB1-202ENST00000394820 TBK1Q9UHD2 729 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 MYH7P12883 1935 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 STXBP3O00186 592 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 ATP2B4P23634 1241 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 MAGOHP61326 146 aaKnown RBP14.47□□□□□ -0.09
NFKB1-202ENST00000394820 GRIPAP1Q4V328 841 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 HNRNPLLQ8WVV9 542 aaKnown RBP14.47□□□□□ -0.09
NFKB1-202ENST00000394820 MAGOHBQ96A72 148 aaKnown RBP14.47□□□□□ -0.09
NFKB1-202ENST00000394820 GJD4Q96KN9 370 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-202ENST00000394820 BARHL2Q9NY43 387 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 SHANK3Q9BYB0 1731 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 DAPK3O43293 454 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 SP4Q02446 784 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 TRIP13Q15645 432 aaPredicted RBP14.47□□□□□ -0.09
NFKB1-202ENST00000394820 RC3H1Q5TC82 1133 aaKnown RBP14.47□□□□□ -0.09
NFKB1-202ENST00000394820 BANK1Q8NDB2 785 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 ODF2LQ9ULJ1 636 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 AFF2P51816 1311 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 MYH3P11055 1940 aa14.47□□□□□ -0.09
NFKB1-202ENST00000394820 NKRFO15226 690 aaKnown RBP eCLIP14.46□□□□□ -0.09
NFKB1-202ENST00000394820 TAL1P17542 331 aaPredicted RBP14.46□□□□□ -0.09
NFKB1-202ENST00000394820 NR2F2P24468 414 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 SLC30A10Q6XR72 485 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 TNFRSF25Q93038 417 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 RTFDC1Q9BY42 306 aaPredicted RBP14.46□□□□□ -0.09
NFKB1-202ENST00000394820 TRIM9Q9C026 710 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 PRPF6O94906 941 aaKnown RBP14.46□□□□□ -0.09
NFKB1-202ENST00000394820 GYS1P13807 737 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 KLRC1P26715 233 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 TRAPPC10P48553 1259 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 SEPT7Q16181 437 aaKnown RBP14.46□□□□□ -0.09
NFKB1-202ENST00000394820 PRR16Q569H4 304 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 PDXDC2PQ6P474 469 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 SLF2Q8IX21 1173 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 KCNQ5Q9NR82 932 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 CTTNBP2NLQ9P2B4 639 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 RAB21Q9UL25 225 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 UTP11Q9Y3A2 253 aaKnown RBP14.46□□□□□ -0.09
NFKB1-202ENST00000394820 PCDHAC2Q9Y5I4 1007 aa14.46□□□□□ -0.09
NFKB1-202ENST00000394820 EIF3HO15372 352 aaKnown RBP eCLIP14.46□□□□□ -0.1
NFKB1-202ENST00000394820 MAN2A1Q16706 1144 aa14.46□□□□□ -0.1
NFKB1-202ENST00000394820 DHTKD1Q96HY7 919 aaPredicted RBP14.46□□□□□ -0.1
NFKB1-202ENST00000394820 QTRT2Q9H974 415 aaKnown RBP14.46□□□□□ -0.1
NFKB1-202ENST00000394820 SAMD15Q9P1V8 674 aa14.46□□□□□ -0.1
NFKB1-202ENST00000394820 ARHGAP20Q9P2F6 1191 aa14.46□□□□□ -0.1
NFKB1-202ENST00000394820 SNX24Q9Y343 169 aa14.46□□□□□ -0.1
NFKB1-202ENST00000394820 PLCG2P16885 1265 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 CDC25CP30307 473 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 STAT3P40763 770 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 SNX1Q13596 522 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 FAM83BQ5T0W9 1011 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 WDR59Q6PJI9 974 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 KRT25Q7Z3Z0 450 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 CCDC65Q8IXS2 484 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 MTMR8Q96EF0 704 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 CCT8L2Q96SF2 557 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 ELAC2Q9BQ52 826 aaKnown RBP14.45□□□□□ -0.1
NFKB1-202ENST00000394820 THAP9Q9H5L6 903 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 DAGLAQ9Y4D2 1042 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 EP400Q96L91 3159 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 SPDYE3A6NKU9 549 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 SKAP2O75563 359 aaPredicted RBP14.45□□□□□ -0.1
NFKB1-202ENST00000394820 CCDC172P0C7W6 258 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 PPP2R5AQ15172 486 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 SHROOM1Q2M3G4 852 aaPredicted RBP14.45□□□□□ -0.1
NFKB1-202ENST00000394820 SH2D3AQ9BRG2 576 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 HAUS2Q9NVX0 235 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 PPEF1O14829 653 aaPredicted RBP14.45□□□□□ -0.1
NFKB1-202ENST00000394820 GDF11O95390 407 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 LSP1P33241 339 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 ADCY7P51828 1080 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 NT5DC1Q5TFE4 455 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 SPICE1Q8N0Z3 855 aa14.45□□□□□ -0.1
NFKB1-202ENST00000394820 A0A1W2PRG0 241 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L15C9J2P7 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L13C9JLJ4 530 aa14.44□□□□□ -0.1
NFKB1-202ENST00000394820 USP17L11C9JVI0 530 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms