RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 ELOA2Q8IYF1 753 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 AOPEPQ8N6M6 819 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 LRRC15Q8TF66 581 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CRYGNQ8WXF5 182 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 HAS1Q92839 578 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 ATG4CQ96DT6 458 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 NAT10Q9H0A0 1025 aaKnown RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 SLC38A10Q9HBR0 1119 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 DISC1Q9NRI5 854 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 LRWD1Q9UFC0 647 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 PPP1R9AQ9ULJ8 1098 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 AFG3L2Q9Y4W6 797 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 VWA5AO00534 786 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 GCFC2P16383 781 aaKnown RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 PLCG1P19174 1290 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 ZNF76P36508 570 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 SREBF1P36956 1147 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 SARSP49591 514 aaKnown RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 CBX1P83916 185 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CUL4BQ13620 913 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 TTLL12Q14166 644 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 PTPRNQ16849 979 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 TMEM266Q2M3C6 531 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 NOL9Q5SY16 702 aaKnown RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 IGSF22Q8N9C0 903 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CDCA5Q96FF9 252 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CCDC34Q96HJ3 373 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CLMNQ96JQ2 1002 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 AK8Q96MA6 479 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 MMTAG2Q9BU76 263 aaKnown RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 CCSER1Q9C0I3 900 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 TSPYL1Q9H0U9 437 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 TAF1DQ9H5J8 278 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 PRDM10Q9NQV6 1147 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 TMOD4Q9NZQ9 345 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 PCDHA12Q9UN75 941 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 CTDP1Q9Y5B0 961 aaPredicted RBP7.79□□□□□ -1.16
RTN4-205ENST00000394609 SNCAIPQ9Y6H5 919 aa7.79□□□□□ -1.16
RTN4-205ENST00000394609 ABCB11O95342 1321 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 CYP3A7-CYP3A51PA0A087WV96 503 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 C19orf81C9J6K1 198 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 SIAH2O43255 324 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 ZBED4O75132 1171 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 SMC2O95347 1197 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 CYP3A7P24462 503 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 STAT3P40763 770 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 DPYDQ12882 1025 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 DHX8Q14562 1220 aaKnown RBP7.78□□□□□ -1.16
RTN4-205ENST00000394609 MUM1L1Q5H9M0 696 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 NT5DC1Q5TFE4 455 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 MCTP2Q6DN12 878 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 SPATA20Q8TB22 786 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 CLEC4DQ8WXI8 215 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 PYM1Q9BRP8 204 aaKnown RBP7.78□□□□□ -1.16
RTN4-205ENST00000394609 ELP3Q9H9T3 547 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 DDX41Q9UJV9 622 aaKnown RBP7.78□□□□□ -1.16
RTN4-205ENST00000394609 CSADQ9Y600 493 aa7.78□□□□□ -1.16
RTN4-205ENST00000394609 DICER1Q9UPY3 1922 aaKnown RBP7.77□□□□□ -1.16
RTN4-205ENST00000394609 SPDYE5A6NIY4 337 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 IREB2P48200 963 aaKnown RBP7.77□□□□□ -1.17
RTN4-205ENST00000394609 FMR1Q06787 632 aaKnown RBP eCLIP7.77□□□□□ -1.175e-11■□□□□ 8.4
RTN4-205ENST00000394609 MORC3Q14149 939 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 PDIA5Q14554 519 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 COG2Q14746 738 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 SLC30A10Q6XR72 485 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 SMYD4Q8IYR2 804 aaPredicted RBP7.77□□□□□ -1.17
RTN4-205ENST00000394609 SNX29Q8TEQ0 813 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 LENG9Q96B70 501 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 NAP1L4Q99733 375 aaKnown RBP7.77□□□□□ -1.17
RTN4-205ENST00000394609 RAB34Q9BZG1 259 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 TRIM5Q9C035 493 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 KCNMB3Q9NPA1 279 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 COL20A1Q9P218 1284 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 RIPK3Q9Y572 518 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 IQCA1LA6NCM1 817 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 TRAF5O00463 557 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 PEX10O60683 326 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 SSTR3P32745 418 aaPredicted RBP7.77□□□□□ -1.17
RTN4-205ENST00000394609 NF2P35240 595 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 GRB10Q13322 594 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 NCAPHQ15003 741 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 ECM1Q16610 540 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 TREML2Q5T2D2 321 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 KRT79Q5XKE5 535 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 MAP1SQ66K74 1059 aaPredicted RBP7.77□□□□□ -1.17
RTN4-205ENST00000394609 PTCRAQ6ISU1 281 aaPredicted RBP7.77□□□□□ -1.17
RTN4-205ENST00000394609 CATSPERGQ6ZRH7 1159 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 NPAS3Q8IXF0 933 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 ETNPPLQ8TBG4 499 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 CALML4Q96GE6 196 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 CDK5RAP3Q96JB5 506 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 C12orf42Q96LP6 360 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 MBOAT7Q96N66 472 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 TRERF1Q96PN7 1200 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 GSDMAQ96QA5 445 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 PURBQ96QR8 312 aaKnown RBP7.77□□□□□ -1.17
RTN4-205ENST00000394609 BPIFA3Q9BQP9 254 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 ZNF408Q9H9D4 720 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 KCND1Q9NSA2 647 aa7.77□□□□□ -1.17
RTN4-205ENST00000394609 FAM53CQ9NYF3 392 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms