RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 HYIQ5T013 277 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 TMEM179Q6ZVK1 233 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 IDI2Q9BXS1 227 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 BCAS3Q9H6U6 928 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 SCN9AQ15858 1988 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 SMCHD1A6NHR9 2005 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 BRWD3Q6RI45 1802 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 SPDYE3A6NKU9 549 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 MAGEA1P43355 309 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 POLR2FP61218 127 aaKnown RBP21.6■■□□□ 1.05
RCCD1-201ENST00000394258 TATDN1Q6P1N9 297 aa21.6■■□□□ 1.05
RCCD1-201ENST00000394258 LSM14BQ9BX40 385 aaKnown RBP21.6■■□□□ 1.05
RCCD1-201ENST00000394258 QSER1Q2KHR3 1735 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 NCK2O43639 380 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 RASSF7Q02833 373 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 ADAM9Q13443 819 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 PDXDC1Q6P996 788 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 PRMT6Q96LA8 375 aaPredicted RBP21.59■■□□□ 1.05
RCCD1-201ENST00000394258 GBP3Q9H0R5 595 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 SH2D4AQ9H788 454 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.59■■□□□ 1.05
RCCD1-201ENST00000394258 EIF3JO75822 258 aaKnown RBP21.59■■□□□ 1.05
RCCD1-201ENST00000394258 SLFN12Q8IYM2 578 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 ETNPPLQ8TBG4 499 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 NAP1L4Q99733 375 aaKnown RBP21.59■■□□□ 1.05
RCCD1-201ENST00000394258 GLT8D2Q9H1C3 349 aa21.59■■□□□ 1.05
RCCD1-201ENST00000394258 A0A1W2PRG0 241 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 H0YIN7 160 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 BUB1O43683 1085 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 MATR3P43243 847 aaKnown RBP eCLIP21.58■■□□□ 1.05
RCCD1-201ENST00000394258 SLC12A3P55017 1021 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 NAP1L1P55209 391 aaKnown RBP21.58■■□□□ 1.05
RCCD1-201ENST00000394258 GPS2Q13227 327 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 NFRKBQ6P4R8 1299 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 HDAC7Q8WUI4 952 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 RIN2Q8WYP3 895 aaPredicted RBP21.58■■□□□ 1.05
RCCD1-201ENST00000394258 TSGA10Q9BZW7 698 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 ABCB11O95342 1321 aa21.58■■□□□ 1.05
RCCD1-201ENST00000394258 TACC1O75410 805 aa21.58■■□□□ 1.04
RCCD1-201ENST00000394258 NOL4O94818 638 aa21.58■■□□□ 1.04
RCCD1-201ENST00000394258 SPIRE1Q08AE8 756 aa21.58■■□□□ 1.04
RCCD1-201ENST00000394258 FAM83BQ5T0W9 1011 aa21.58■■□□□ 1.04
RCCD1-201ENST00000394258 SYDE2Q5VT97 1194 aa21.58■■□□□ 1.04
RCCD1-201ENST00000394258 CREG2Q8IUH2 290 aa21.58■■□□□ 1.04
RCCD1-201ENST00000394258 IQCDQ96DY2 449 aa21.58■■□□□ 1.04
RCCD1-201ENST00000394258 GREB1LQ9C091 1923 aaPredicted RBP21.57■■□□□ 1.04
RCCD1-201ENST00000394258 CYP3A7-CYP3A51PA0A087WV96 503 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 MYO1CO00159 1063 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 CYP3A7P24462 503 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 EXOC4Q96A65 974 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 CSRNP1Q96S65 589 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 KCTD10Q9H3F6 313 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 COL11A2P13942 1736 aaPredicted RBP21.57■■□□□ 1.04
RCCD1-201ENST00000394258 SIPA1L1O43166 1804 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 SPATA31C1P0DKV0 1188 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 BMP3P12645 472 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 ZNF76P36508 570 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 ECE1P42892 770 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.57■■□□□ 1.04
RCCD1-201ENST00000394258 TRIM58Q8NG06 486 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 LENG9Q96B70 501 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 SNX12Q9UMY4 172 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 NRXN2Q9P2S2 1712 aa21.57■■□□□ 1.04
RCCD1-201ENST00000394258 ANO9A1A5B4 782 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 TLR2O60603 784 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 EPS15P42566 896 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 CKAP4Q07065 602 aaKnown RBP21.56■■□□□ 1.04
RCCD1-201ENST00000394258 AP3B2Q13367 1082 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 RBM26Q5T8P6 1007 aaKnown RBP21.56■■□□□ 1.04
RCCD1-201ENST00000394258 HAUS3Q68CZ6 603 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 CRYGNQ8WXF5 182 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 DNM3Q9UQ16 869 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 RSPH10B2B2RC85 870 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 TCP10L2B9ZVM9 353 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 RSPH10BP0C881 870 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 NR2F2P24468 414 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 DNA2P51530 1060 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 HGSNATQ68CP4 663 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 SFR1Q86XK3 245 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 REEP2Q9BRK0 252 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 RGL1Q9NZL6 768 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 JRKLQ9Y4A0 524 aa21.56■■□□□ 1.04
RCCD1-201ENST00000394258 OPLAHO14841 1288 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 PRPF6O94906 941 aaKnown RBP21.55■■□□□ 1.04
RCCD1-201ENST00000394258 RAPGEF1Q13905 1077 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 GIT2Q14161 759 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 TRIM59Q8IWR1 403 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 TBC1D5Q92609 795 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 RASSF4Q9H2L5 321 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 CLRN2A0PK11 232 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 SFI1A8K8P3 1242 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 MSH4O15457 936 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 UBXN2AP68543 259 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 SFMBT2Q5VUG0 894 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 CEP63Q96MT8 703 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 MBOAT7Q96N66 472 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.55■■□□□ 1.04
RCCD1-201ENST00000394258 BHMT2Q9H2M3 363 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 SERPINA10Q9UK55 444 aa21.55■■□□□ 1.04
RCCD1-201ENST00000394258 C10orf71Q711Q0 1435 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms