RNA–Protein interactions for RNA: ENST00000394180.6

CLDND1-202, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDND1, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-202ENST00000394180 NR5A1Q13285 461 aa23.84■■□□□ 1.41
CLDND1-202ENST00000394180 RTN1Q16799 776 aa23.84■■□□□ 1.41
CLDND1-202ENST00000394180 DTNBP1Q96EV8 351 aa23.84■■□□□ 1.41
CLDND1-202ENST00000394180 BRIP1Q9BX63 1249 aa23.84■■□□□ 1.41
CLDND1-202ENST00000394180 LUC7LQ9NQ29 371 aaKnown RBP23.84■■□□□ 1.41
CLDND1-202ENST00000394180 IRAK4Q9NWZ3 460 aa23.84■■□□□ 1.41
CLDND1-202ENST00000394180 CNOT8Q9UFF9 292 aaKnown RBP23.84■■□□□ 1.41
CLDND1-202ENST00000394180 RXRAP19793 462 aa23.83■■□□□ 1.41
CLDND1-202ENST00000394180 TMOD1P28289 359 aa23.83■■□□□ 1.41
CLDND1-202ENST00000394180 UAP1Q16222 522 aaPredicted RBP23.83■■□□□ 1.41
CLDND1-202ENST00000394180 TBC1D25Q3MII6 688 aa23.83■■□□□ 1.41
CLDND1-202ENST00000394180 THEMIS2Q5TEJ8 643 aa23.83■■□□□ 1.41
CLDND1-202ENST00000394180 PNMA8AQ86V59 439 aaPredicted RBP23.83■■□□□ 1.41
CLDND1-202ENST00000394180 KLHL23Q8NBE8 558 aa23.83■■□□□ 1.41
CLDND1-202ENST00000394180 INPP4AQ96PE3 977 aaPredicted RBP23.83■■□□□ 1.41
CLDND1-202ENST00000394180 RNF26Q9BY78 433 aaPredicted RBP23.83■■□□□ 1.41
CLDND1-202ENST00000394180 NSRP1Q9H0G5 558 aaKnown RBP23.83■■□□□ 1.41
CLDND1-202ENST00000394180 PUS7LQ9H0K6 701 aaKnown RBP23.83■■□□□ 1.41
CLDND1-202ENST00000394180 MAGEA1P43355 309 aa23.83■■□□□ 1.4
CLDND1-202ENST00000394180 R3HDM1Q15032 1099 aaKnown RBP23.83■■□□□ 1.4
CLDND1-202ENST00000394180 CROCCP2Q86T23 111 aa23.83■■□□□ 1.4
CLDND1-202ENST00000394180 IFT74Q96LB3 600 aa23.83■■□□□ 1.4
CLDND1-202ENST00000394180 PLCD4Q9BRC7 762 aa23.83■■□□□ 1.4
CLDND1-202ENST00000394180 YIPF3Q9GZM5 350 aa23.83■■□□□ 1.4
CLDND1-202ENST00000394180 PANK4Q9NVE7 773 aa23.83■■□□□ 1.4
CLDND1-202ENST00000394180 BICDL2A1A5D9 508 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 ZBTB7AO95365 584 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 ECHS1P30084 290 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 GUCY1A2P33402 732 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 TRAPPC10P48553 1259 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 GRAPQ13588 217 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 PUM3Q15397 648 aaKnown RBP23.82■■□□□ 1.4
CLDND1-202ENST00000394180 TTI2Q6NXR4 508 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 GRAPLQ8TC17 118 aaPredicted RBP23.82■■□□□ 1.4
CLDND1-202ENST00000394180 BICD1Q96G01 975 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 POLD4Q9HCU8 107 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 SAMD15Q9P1V8 674 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 ARHGAP20Q9P2F6 1191 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 L3MBTL1Q9Y468 752 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 TIAM2Q8IVF5 1701 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 KLRG2A4D1S0 409 aaPredicted RBP23.82■■□□□ 1.4
CLDND1-202ENST00000394180 PHF20L1A8MW92 1017 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 ATP2A2P16615 1042 aaKnown RBP23.82■■□□□ 1.4
CLDND1-202ENST00000394180 FKBP15Q5T1M5 1219 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 APBB1IPQ7Z5R6 666 aaPredicted RBP23.82■■□□□ 1.4
CLDND1-202ENST00000394180 CFAP61Q8NHU2 1237 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 NUP133Q8WUM0 1156 aa23.82■■□□□ 1.4
CLDND1-202ENST00000394180 ABCB11O95342 1321 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 FGFR2P21802 821 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 KRT2P35908 639 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 ANKRD20A2Q5SQ80 823 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 ANKRD20A1Q5TYW2 823 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 ANKRD20A3Q5VUR7 823 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 USP38Q8NB14 1042 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 KRT12Q99456 494 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 NOVA2Q9UNW9 492 aaKnown RBP23.81■■□□□ 1.4
CLDND1-202ENST00000394180 LRRC42Q9Y546 428 aa23.81■■□□□ 1.4
CLDND1-202ENST00000394180 GPR75-ASB3A0A0A6YYF3 556 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 LRRD1A4D1F6 860 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 B4E1Z4 1266 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 CXCR5P32302 372 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 MRPS25P82663 173 aaKnown RBP23.8■■□□□ 1.4
CLDND1-202ENST00000394180 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.8■■□□□ 1.4
CLDND1-202ENST00000394180 TRIM47Q96LD4 638 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 MTRQ99707 1265 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 ASB3Q9Y575 518 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 ESYT3A0FGR9 886 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 GALNTL6Q49A17 601 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 TBC1D1Q86TI0 1168 aaPredicted RBP23.8■■□□□ 1.4
CLDND1-202ENST00000394180 HOOK3Q86VS8 718 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 NAF1Q96HR8 494 aaKnown RBP23.8■■□□□ 1.4
CLDND1-202ENST00000394180 KRT23Q9C075 422 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 UTRNP46939 3433 aa23.8■■□□□ 1.4
CLDND1-202ENST00000394180 RAD51CO43502 376 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 AKR1B10O60218 316 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 ATP2C2O75185 946 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 RHOBTB3O94955 611 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 ASTE1Q2TB18 679 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 ILDR2Q71H61 639 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 KRT26Q7Z3Y9 468 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 LPIN2Q92539 896 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 BLZF1Q9H2G9 400 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 EHD2Q9NZN4 543 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 MYH10P35580 1976 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 COQ9O75208 318 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 EIF4A3P38919 411 aaKnown RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 MAGOHP61326 146 aaKnown RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 FKBP4Q02790 459 aaKnown RBP eCLIP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 ARL6IP4Q66PJ3 421 aaKnown RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 CCDC84Q86UT8 332 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 GIMAP8Q8ND71 665 aaPredicted RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 MAGOHBQ96A72 148 aaKnown RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 RBM17Q96I25 401 aaKnown RBP23.79■■□□□ 1.4
CLDND1-202ENST00000394180 PHF20Q9BVI0 1012 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 OSBPL1AQ9BXW6 950 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 RAB17Q9H0T7 212 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 SMARCAL1Q9NZC9 954 aa23.79■■□□□ 1.4
CLDND1-202ENST00000394180 ZSCAN5CA6NGD5 496 aaPredicted RBP23.78■■□□□ 1.4
CLDND1-202ENST00000394180 CTCFP49711 727 aaPredicted RBP23.78■■□□□ 1.4
CLDND1-202ENST00000394180 LACTBP83111 547 aaPredicted RBP23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms