RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 ASPRV1Q53RT3 343 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 PRAMEF18Q5VWM3 479 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 USP49Q70CQ1 688 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 SLC9A9Q8IVB4 645 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 ADGRF4Q8IZF3 695 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 FMR1NBQ8N0W7 255 aaPredicted RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 JMYQ8N9B5 988 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 ACER1Q8TDN7 264 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 TNFRSF25Q93038 417 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 EMID1Q96A84 441 aaPredicted RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 APBA2Q99767 749 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 LZTS2Q9BRK4 669 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 RSRP1Q9BUV0 290 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 C1QTNF2Q9BXJ5 285 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 JMJD4Q9H9V9 463 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 SERTAD1Q9UHV2 236 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 CDV3Q9UKY7 258 aaKnown RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 PCDHA4Q9UN74 947 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 FZD1Q9UP38 647 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 COMMD10Q9Y6G5 202 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 POLR2AP24928 1970 aaKnown RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 A0A1W2PQ27 194 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 A0A1W2PQ64 194 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 A0A1W2PQD8 194 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 SMCO2A6NFE2 343 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 POTECB2RU33 542 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 LETM1O95202 739 aaPredicted RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 SNHG28P0DPA3 235 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 CALML3P27482 149 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 PSMA6P60900 246 aaKnown RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 ERVK-9P63128 1117 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 TYRO3Q06418 890 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 COL9A2Q14055 689 aaPredicted RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 INF2Q27J81 1249 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 TBCELQ5QJ74 424 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 TTC38Q5R3I4 469 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 JAKMIP3Q5VZ66 844 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 PDILTQ8N807 584 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 EAF1Q96JC9 268 aaPredicted RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 SYT17Q9BSW7 474 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 FUCA2Q9BTY2 467 aa6.64□□□□□ -1.35
CASC3-202ENST00000394114 HERC5Q9UII4 1024 aaKnown RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 NOL7Q9UMY1 257 aaKnown RBP6.64□□□□□ -1.35
CASC3-202ENST00000394114 FZD9O00144 591 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 RRP9O43818 475 aaKnown RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 PPP1R11O60927 126 aaPredicted RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 PPP6R2O75170 966 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 ZNF202O95125 648 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 NDUFB10O96000 172 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 CCDC192P0DO97 292 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 CMA1P23946 247 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 PSEN2P49810 448 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 ANO6Q4KMQ2 910 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 BRDTQ58F21 947 aaPredicted RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 ISM2Q6H9L7 571 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 CCDC148Q8NFR7 591 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 EPS8L3Q8TE67 593 aaKnown RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 ZBED3Q96IU2 234 aaPredicted RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 DCBLD2Q96PD2 775 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 GLIS2Q9BZE0 524 aaPredicted RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 RIOX1Q9H6W3 641 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 PRDM9Q9NQV7 894 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 HACL1Q9UJ83 578 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 FBXO2Q9UK22 296 aaPredicted RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 ZBTB21Q9ULJ3 1066 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 PCDHA6Q9UN73 950 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 PCDHA8Q9Y5H6 950 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 VWA3AA6NCI4 1184 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 BIN1O00499 593 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 IRS1P35568 1242 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 SYKP43405 635 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 NFE2Q16621 373 aaPredicted RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 KIF4BQ2VIQ3 1234 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 SASS6Q6UVJ0 657 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 JAMLQ86YT9 394 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 TRMT44Q8IYL2 757 aaKnown RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 CCDC74AQ96AQ1 378 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 CSRNP2Q9H175 543 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 ETNK1Q9HBU6 452 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 SH3GLB2Q9NR46 395 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 NYAP2Q9P242 653 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 PNMA2Q9UL42 364 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 ATP8A1Q9Y2Q0 1164 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 LTBP3Q9NS15 1303 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 TMEM232C9JQI7 657 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 CUTAO60888 179 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 YBX3P16989 372 aaKnown RBP eCLIP6.63□□□□□ -1.354e-8■■■□□ 18.1
CASC3-202ENST00000394114 ZNF280AP59817 542 aaPredicted RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 DGKZQ13574 1117 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 MTFR1Q15390 333 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 UBE2SQ16763 222 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 USH1GQ495M9 461 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 KIAA1755Q5JYT7 1200 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 GPATCH4Q5T3I0 446 aaKnown RBP6.63□□□□□ -1.35
CASC3-202ENST00000394114 RESP18Q5W5W9 173 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 DLK2Q6UY11 383 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 FAM83AQ86UY5 434 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 FOXJ1Q92949 421 aa6.63□□□□□ -1.35
CASC3-202ENST00000394114 EPSTI1Q96J88 318 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms