RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 TAF6LQ9Y6J9 622 aa17.77■□□□□ 0.44
CHMP3-202ENST00000393773 CYP21A2P08686 494 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 GNAT1P11488 350 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 CTNNB1P35222 781 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 LTBRP36941 435 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 ARHGAP4P98171 946 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 MGAT3Q09327 533 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 RUFY4Q6ZNE9 571 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 RPAINQ86UA6 219 aa17.76■□□□□ 0.43
CHMP3-202ENST00000393773 C19orf67A6NJJ6 358 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 IFIT3O14879 490 aaKnown RBP17.75■□□□□ 0.43
CHMP3-202ENST00000393773 DCXO43602 365 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 CHRNA1P02708 482 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
CHMP3-202ENST00000393773 PCNX4Q63HM2 1172 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 EHMT1Q9H9B1 1298 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 CLDND1Q9NY35 253 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 RTEL1Q9NZ71 1219 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
CHMP3-202ENST00000393773 FNDC1Q4ZHG4 1894 aaPredicted RBP17.75■□□□□ 0.43
CHMP3-202ENST00000393773 TECTAO75443 2155 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 KMT2EQ8IZD2 1858 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 GHRP10912 638 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 ANTXR2P58335 489 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 SP4Q02446 784 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 TRDNQ13061 729 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 WTAPQ15007 396 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 CTC1Q2NKJ3 1217 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 UTP14CQ5TAP6 766 aaKnown RBP17.74■□□□□ 0.43
CHMP3-202ENST00000393773 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 ADHFE1Q8IWW8 467 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 FIBCD1Q8N539 461 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 CLP1Q92989 425 aaKnown RBP17.74■□□□□ 0.43
CHMP3-202ENST00000393773 IL17RAQ96F46 866 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 SENP7Q9BQF6 1050 aa17.74■□□□□ 0.43
CHMP3-202ENST00000393773 PIK3CDO00329 1044 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 MEIS2O14770 477 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 GRM6O15303 877 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 PTH1RQ03431 593 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 HYAL1Q12794 435 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 LPIN1Q14693 890 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 C11orf84Q9BUA3 381 aaPredicted RBP17.73■□□□□ 0.43
CHMP3-202ENST00000393773 SPZ1Q9BXG8 430 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 LMAN2LQ9H0V9 348 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 FAM50BQ9Y247 325 aa17.73■□□□□ 0.43
CHMP3-202ENST00000393773 TBX10O75333 385 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 RB1P06400 928 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 KCNA2P16389 499 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 TCF7P36402 384 aaPredicted RBP17.72■□□□□ 0.43
CHMP3-202ENST00000393773 BMPR1AP36894 532 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 DLX2Q07687 328 aaPredicted RBP17.72■□□□□ 0.43
CHMP3-202ENST00000393773 TAF2Q6P1X5 1199 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 XRRA1Q6P2D8 792 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 USP17L6PQ6QN14 398 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 EP400NLQ6ZTU2 488 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 LINC01599Q8WXQ3 324 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 PIBF1Q8WXW3 757 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 ZNF689Q96CS4 500 aaPredicted RBP17.72■□□□□ 0.43
CHMP3-202ENST00000393773 RWDD3Q9Y3V2 267 aa17.72■□□□□ 0.43
CHMP3-202ENST00000393773 U3KPZ7 1027 aaPredicted RBP17.72■□□□□ 0.43
CHMP3-202ENST00000393773 ERICH2A1L162 156 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 MBLAC1A4D2B0 266 aaPredicted RBP17.71■□□□□ 0.43
CHMP3-202ENST00000393773 E7EWF7 191 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 PDE4AP27815 886 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 IRS1P35568 1242 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 PPFIA1Q13136 1202 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 SMAD2Q15796 467 aaKnown RBP17.71■□□□□ 0.43
CHMP3-202ENST00000393773 CSPP1Q1MSJ5 1256 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 FBXO47Q5MNV8 452 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 TTC22Q5TAA0 569 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 CATIPQ7Z7H3 387 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 RALYLQ86SE5 291 aaKnown RBP17.71■□□□□ 0.43
CHMP3-202ENST00000393773 MB21D2Q8IYB1 491 aaPredicted RBP17.71■□□□□ 0.43
CHMP3-202ENST00000393773 SMARCC2Q8TAQ2 1214 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 UIMC1Q96RL1 719 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 TUBE1Q9UJT0 475 aa17.71■□□□□ 0.43
CHMP3-202ENST00000393773 NCK2O43639 380 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 ATP9AO75110 1047 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 MMP1P03956 469 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 CAMK1Q14012 370 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 SART3Q15020 963 aaKnown RBP17.7■□□□□ 0.42
CHMP3-202ENST00000393773 CLUL1Q15846 466 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 GRIK4Q16099 956 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 MARCH8Q5T0T0 291 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 NLRX1Q86UT6 975 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 ALYREFQ86V81 257 aaKnown RBP17.7■□□□□ 0.42
CHMP3-202ENST00000393773 GIMAP8Q8ND71 665 aaPredicted RBP17.7■□□□□ 0.42
CHMP3-202ENST00000393773 NCOA7Q8NI08 942 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 IGDCC4Q8TDY8 1250 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 GPRASP2Q96D09 838 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 MAP3K14Q99558 947 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 WDR81Q562E7 1941 aa17.7■□□□□ 0.42
CHMP3-202ENST00000393773 USP34Q70CQ2 3546 aa17.69■□□□□ 0.42
CHMP3-202ENST00000393773 GSTTP1A0A1W2PQM5 241 aa17.69■□□□□ 0.42
CHMP3-202ENST00000393773 MBTPS2O43462 519 aa17.69■□□□□ 0.42
CHMP3-202ENST00000393773 DDAH1O94760 285 aa17.69■□□□□ 0.42
CHMP3-202ENST00000393773 ITGB5P18084 799 aa17.69■□□□□ 0.42
CHMP3-202ENST00000393773 MARK3P27448 753 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms