RNA–Protein interactions for RNA: ENST00000393330.6

TSPAN8-202, Transcript of tetraspanin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN8, Length 1,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-202ENST00000393330 CXCL11O14625 94 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 TM4SF5O14894 197 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 ADAM11O75078 769 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 LIG1P18858 919 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 POU3F3P20264 500 aaPredicted RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 ITGB7P26010 798 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 C19orf57Q0VDD7 668 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 CFAP100Q494V2 611 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 CT47A1Q5JQC4 288 aaPredicted RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 ZKSCAN2Q63HK3 967 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 FASTKD5Q7L8L6 764 aaKnown RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 ATL2Q8NHH9 583 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 SMCR8Q8TEV9 937 aaPredicted RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 PNISRQ8TF01 805 aaKnown RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 PMM1Q92871 262 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 RNF34Q969K3 372 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 PRMT6Q96LA8 375 aaPredicted RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 DMRTB1Q96MA1 342 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 WRNIP1Q96S55 665 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 DUSP9Q99956 384 aaKnown RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 BHLHE41Q9C0J9 482 aaPredicted RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 MAF1Q9H063 256 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 SLC28A3Q9HAS3 691 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 MRS2Q9HD23 443 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 NPHS2Q9NP85 383 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 CD320Q9NPF0 282 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 OSGEPQ9NPF4 335 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 METTL5Q9NRN9 209 aaKnown RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 CGNQ9P2M7 1197 aaKnown RBP6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 ANAPC4Q9UJX5 808 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 SMC3Q9UQE7 1217 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 SLC45A1Q9Y2W3 748 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 TACC3Q9Y6A5 838 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 LRRC37AA6NMS7 1700 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 MED23Q9ULK4 1368 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 CFAP54Q96N23 3096 aa6.12□□□□□ -1.43
TSPAN8-202ENST00000393330 DDX60LQ5H9U9 1706 aaKnown RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 A0A096LPE4 126 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 CCDC194A0A1B0GVG4 234 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 A0A1W2PPZ6 126 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 EPB41L2O43491 1005 aaKnown RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 KIF1CO43896 1103 aaKnown RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 MSCO60682 206 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 PARNO95453 639 aaKnown RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 LDHBP07195 334 aaKnown RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 CT47B1P0C2W7 299 aaPredicted RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 H2AFB1P0C5Y9 115 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 H2AFB2P0C5Z0 115 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 DNAJA1P31689 397 aaKnown RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 RHBDL3P58872 404 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 FPGSQ05932 587 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 SPRED3Q2MJR0 410 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 PRSS33Q8NF86 280 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 CCDC74AQ96AQ1 378 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 TEPSINQ96N21 525 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 NCAPGQ9BPX3 1015 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 EHD4Q9H223 541 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 SUDS3Q9H7L9 328 aaPredicted RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 ZSWIM4Q9H7M6 989 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 PDLIM7Q9NR12 457 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 MIS18AQ9NYP9 233 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 GJD2Q9UKL4 321 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 NUP98P52948 1817 aa6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 RPAP1Q9BWH6 1393 aaPredicted RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 ANKRD11Q6UB99 2663 aaPredicted RBP6.11□□□□□ -1.43
TSPAN8-202ENST00000393330 DNM1LO00429 736 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 GADD45BO75293 160 aaPredicted RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 PRPF40AO75400 957 aaKnown RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 EIF3JO75822 258 aaKnown RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 IGHA2P01877 340 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 ZNF853P0CG23 659 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 ESRRAP11474 423 aaPredicted RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 XRCC5P13010 732 aaKnown RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 ZNF76P36508 570 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 GRIA4P48058 902 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 RBM5P52756 815 aaKnown RBP eCLIP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 EIF4A1P60842 406 aaKnown RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 NFE2L2Q16236 605 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 FAM110CQ1W6H9 321 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 PRSS36Q5K4E3 855 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 DCAF15Q66K64 600 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 SLC39A5Q6ZMH5 540 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 KIAA1211Q6ZU35 1233 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 CCNJLQ8IV13 435 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 FAM178BQ8IXR5 827 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 DZIP1LQ8IYY4 767 aaKnown RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 UBL7Q96S82 380 aaPredicted RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 TCF12Q99081 682 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 SMC4Q9NTJ3 1288 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 VTI1BQ9UEU0 232 aa6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 RIF1Q5UIP0 2472 aaKnown RBP6.1□□□□□ -1.43
TSPAN8-202ENST00000393330 MED19A0JLT2 244 aaPredicted RBP6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 TRIM43BA6NCK2 446 aa6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 PROB1E7EW31 1015 aa6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 SORBS3O60504 671 aa6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 COQ9O75208 318 aa6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 RAG1P15918 1043 aa6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 MAPK8P45983 427 aa6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 GSTM4Q03013 218 aa6.09□□□□□ -1.43
TSPAN8-202ENST00000393330 MOGSQ13724 837 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms