RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 TBC1D22AQ8WUA7 517 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 LMBR1Q8WVP7 490 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 PIK3R5Q8WYR1 880 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 CUL5Q93034 780 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 ZFP91Q96JP5 570 aaPredicted RBP10.98□□□□□ -0.65
COL17A1-203ENST00000393211 MXD3Q9BW11 206 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 GANQ9H2C0 597 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 KCTD10Q9H3F6 313 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 CPVLQ9H3G5 476 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 NLRC4Q9NPP4 1024 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 EHD2Q9NZN4 543 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 DDX25Q9UHL0 483 aaKnown RBP10.98□□□□□ -0.65
COL17A1-203ENST00000393211 INTUQ9ULD6 942 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 PCDHA12Q9UN75 941 aa10.98□□□□□ -0.65
COL17A1-203ENST00000393211 A0A0A6YYK5 440 aaPredicted RBP10.97□□□□□ -0.65
COL17A1-203ENST00000393211 GOLGA6L10A6NI86 522 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 GFPT2O94808 682 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 FSBPO95073 299 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 NR1D1P20393 614 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 ATP2B4P23634 1241 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 GUCY2CP25092 1073 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 LSP1P33241 339 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 PRKCIP41743 596 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 GTF2A1P52655 376 aaPredicted RBP10.97□□□□□ -0.65
COL17A1-203ENST00000393211 NPEPPSP55786 919 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 RHBDL3P58872 404 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 DRP2Q13474 957 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 BIRC3Q13489 604 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 MTMR3Q13615 1198 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 LRRC41Q15345 812 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 GPATCH4Q5T3I0 446 aaKnown RBP10.97□□□□□ -0.65
COL17A1-203ENST00000393211 MOXD1Q6UVY6 613 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 KCTD17Q8N5Z5 321 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 SCFD2Q8WU76 684 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 CASKIN2Q8WXE0 1202 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 HAS1Q92839 578 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 MS4A14Q96JA4 679 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 PSMB7Q99436 277 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 KRT12Q99456 494 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 NUDT12Q9BQG2 462 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 EMILIN3Q9NT22 766 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 SMARCAL1Q9NZC9 954 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 JAG2Q9Y219 1238 aa10.97□□□□□ -0.65
COL17A1-203ENST00000393211 CYP3A7-CYP3A51PA0A087WV96 503 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 A0A087X0T9 212 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 MEFVO15553 781 aaPredicted RBP10.96□□□□□ -0.65
COL17A1-203ENST00000393211 MARCH6O60337 910 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 PPP1R37O75864 691 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 KIF4AO95239 1232 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 FTCDO95954 541 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 FAM228BP0C875 321 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 CYP3A7P24462 503 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 MDH1P40925 334 aaKnown RBP10.96□□□□□ -0.65
COL17A1-203ENST00000393211 EPS15P42566 896 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 ZNF543Q08ER8 600 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 ADAM9Q13443 819 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 RAPGEF1Q13905 1077 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 PLCB4Q15147 1175 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 SPDYCQ5MJ68 293 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 RUFY4Q6ZNE9 571 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 CNPY4Q8N129 248 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 IFT81Q8WYA0 676 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 COA7Q96BR5 231 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 TMBIM4Q9HC24 238 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 METTL14Q9HCE5 456 aaKnown RBP10.96□□□□□ -0.65
COL17A1-203ENST00000393211 CD209Q9NNX6 404 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 TRAF3IP3Q9Y228 551 aa10.96□□□□□ -0.65
COL17A1-203ENST00000393211 ATF5Q9Y2D1 282 aaPredicted RBP10.96□□□□□ -0.65
COL17A1-203ENST00000393211 RAD51CO43502 376 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 KCNQ2O43526 872 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 FLOT1O75955 427 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 KRT14P02533 472 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 FAM153BP0C7A2 387 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 PLA2G4BP0C869 781 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 TNNI2P48788 182 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 ATP2B2Q01814 1243 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 GABPAQ06546 454 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 KCNH2Q12809 1159 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 ITGB3BPQ13352 177 aaPredicted RBP10.95□□□□□ -0.66
COL17A1-203ENST00000393211 PDCLQ13371 301 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 GRIK5Q16478 980 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 PTGISQ16647 500 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 FAM153CQ494X1 144 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 AGBL2Q5U5Z8 902 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 IRF2BP2Q7Z5L9 587 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 VPS36Q86VN1 386 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 SLFN12Q8IYM2 578 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 SYCE1Q8N0S2 351 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 OTUD6BQ8N6M0 293 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 PRPF38AQ8NAV1 312 aaKnown RBP10.95□□□□□ -0.66
COL17A1-203ENST00000393211 SCFD1Q8WVM8 642 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 RNPC3Q96LT9 517 aaKnown RBP10.95□□□□□ -0.66
COL17A1-203ENST00000393211 MBOAT7Q96N66 472 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL17A1-203ENST00000393211 SLITRK6Q9H5Y7 841 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 JMJD4Q9H9V9 463 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 ADAMTS1Q9UHI8 967 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 FAM153AQ9UHL3 310 aa10.95□□□□□ -0.66
COL17A1-203ENST00000393211 DIS3Q9Y2L1 958 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms