RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 ARHGEF16Q5VV41 709 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 TSC1Q92574 1164 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 A1CFQ9NQ94 594 aaKnown RBP16.67■□□□□ 0.26
MKS1-202ENST00000393119 ZHX1Q9UKY1 873 aaPredicted RBP16.67■□□□□ 0.26
MKS1-202ENST00000393119 KDM3AQ9Y4C1 1321 aa16.67■□□□□ 0.26
MKS1-202ENST00000393119 RNF225M0QZC1 329 aaPredicted RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 CNTN2Q02246 1040 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 USP50Q70EL3 339 aaPredicted RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 P2RX5Q93086 422 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 PAGR1Q9BTK6 254 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 BMP2KQ9NSY1 1161 aaPredicted RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 TRMT1Q9NXH9 659 aaKnown RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 DNM3Q9UQ16 869 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 COL11A1P12107 1806 aaPredicted RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 PSMA7O14818 248 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 KRT18P05783 430 aaKnown RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 IREB2P48200 963 aaKnown RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 GIT2Q14161 759 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 HERC4Q5GLZ8 1057 aaPredicted RBP16.66■□□□□ 0.26
MKS1-202ENST00000393119 SH3D19Q5HYK7 790 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 HAUS3Q68CZ6 603 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 CSGALNACT2Q8N6G5 542 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 ARID3AQ99856 593 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 REEP2Q9BRK0 252 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 UBIAD1Q9Y5Z9 338 aa16.66■□□□□ 0.26
MKS1-202ENST00000393119 ASTN1O14525 1302 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 CBFA2T2O43439 604 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 RGS20O76081 388 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 PPP2R5CQ13362 524 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 MTMR1Q13613 665 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 CNNM4Q6P4Q7 775 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 OPTNQ96CV9 577 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 AGO4Q9HCK5 861 aaKnown RBP16.65■□□□□ 0.26
MKS1-202ENST00000393119 TXNRD2Q9NNW7 524 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 PCDHA2Q9Y5H9 948 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 PES1O00541 588 aaKnown RBP16.65■□□□□ 0.26
MKS1-202ENST00000393119 KIF20AO95235 890 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 SP4Q02446 784 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 PCNX4Q63HM2 1172 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 B3GNT9Q6UX72 402 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 ERMNQ8TAM6 284 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 TEX13BQ9BXU2 312 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 CYP39A1Q9NYL5 469 aa16.65■□□□□ 0.26
MKS1-202ENST00000393119 PVALEFA0A1B0GWK0 134 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 N4BP3O15049 544 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 CCNE1P24864 410 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 COPB1P53618 953 aaKnown RBP16.64■□□□□ 0.25
MKS1-202ENST00000393119 KCNA1Q09470 495 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 SEMA3FQ13275 785 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 UGCGQ16739 394 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 KSR1Q8IVT5 923 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 SYT2Q8N9I0 419 aaPredicted RBP16.64■□□□□ 0.25
MKS1-202ENST00000393119 ANKRD7Q92527 254 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 TEKT3Q9BXF9 490 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 EHMT1Q9H9B1 1298 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 JADE2Q9NQC1 790 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 HOXC10Q9NYD6 342 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 SAMM50Q9Y512 469 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 PARP14Q460N5 1801 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 OTOFQ9HC10 1997 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 NR3C2P08235 984 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 KLK7P49862 253 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 GHRHRQ02643 423 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 Q3C1V9 767 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 CT47A1Q5JQC4 288 aaPredicted RBP16.64■□□□□ 0.25
MKS1-202ENST00000393119 ANKRD13AQ8IZ07 590 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 LXNQ9BS40 222 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 RABGAP1Q9Y3P9 1069 aa16.64■□□□□ 0.25
MKS1-202ENST00000393119 CCNE2O96020 404 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 TPM3P06753 285 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 RBL2Q08999 1139 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 TBX2Q13207 712 aaPredicted RBP16.63■□□□□ 0.25
MKS1-202ENST00000393119 STIM1Q13586 685 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 FAM26FQ5R3K3 315 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 SPECC1LQ69YQ0 1117 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 SFR1Q86XK3 245 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 CCDC47Q96A33 483 aaKnown RBP16.63■□□□□ 0.25
MKS1-202ENST00000393119 DHTKD1Q96HY7 919 aaPredicted RBP16.63■□□□□ 0.25
MKS1-202ENST00000393119 POLR3CQ9BUI4 534 aaPredicted RBP16.63■□□□□ 0.25
MKS1-202ENST00000393119 IMPACTQ9P2X3 320 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 LIMA1Q9UHB6 759 aaKnown RBP16.63■□□□□ 0.25
MKS1-202ENST00000393119 MYBP10242 640 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 SFPQP23246 707 aaKnown RBP eCLIP16.63■□□□□ 0.25
MKS1-202ENST00000393119 MOGSQ13724 837 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 RINT1Q6NUQ1 792 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 SCFD1Q8WVM8 642 aa16.63■□□□□ 0.25
MKS1-202ENST00000393119 ASCC2Q9H1I8 757 aaPredicted RBP16.63■□□□□ 0.25
MKS1-202ENST00000393119 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
MKS1-202ENST00000393119 B4DLN1 442 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 CTIFO43310 598 aaKnown RBP16.62■□□□□ 0.25
MKS1-202ENST00000393119 PBX1P40424 430 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 CENPPQ6IPU0 288 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 LBX2Q6XYB7 198 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 MIER3Q7Z3K6 550 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
MKS1-202ENST00000393119 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 GPIHBP1Q8IV16 184 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 TC2NQ8N9U0 490 aa16.62■□□□□ 0.25
MKS1-202ENST00000393119 RBM46Q8TBY0 533 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms