RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 TBC1D31Q96DN5 1066 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 PCIF1Q9H4Z3 704 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 MRPL47Q9HD33 250 aaKnown RBP13.73□□□□□ -0.21
CLTC-202ENST00000393043 HEXIM1O94992 359 aaKnown RBP13.73□□□□□ -0.21
CLTC-202ENST00000393043 MAPK4P31152 587 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 CTTNQ14247 550 aaKnown RBP13.73□□□□□ -0.21
CLTC-202ENST00000393043 SEPT14Q6ZU15 432 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 SPATA24Q86W54 205 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 IFT122Q9HBG6 1241 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 SERPINA10Q9UK55 444 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 ZNF148Q9UQR1 794 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 DAAM1Q9Y4D1 1078 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 ITSN1Q15811 1721 aa13.73□□□□□ -0.21
CLTC-202ENST00000393043 SPATA31D1Q6ZQQ2 1576 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 ADAT2Q7Z6V5 191 aaKnown RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 IGDCC4Q8TDY8 1250 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 SPZ1Q9BXG8 430 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 UBE2TQ9NPD8 197 aaPredicted RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 POTEMA6NI47 508 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 C21orf2O43822 256 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 LRRN2O75325 713 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 MOCS3O95396 460 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 HSPA1LP34931 641 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 PRCPP42785 496 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 VPS52Q8N1B4 723 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 GJD4Q96KN9 370 aaPredicted RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 TLR3O15455 904 aaKnown RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 ARHGAP4P98171 946 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 RNF207Q6ZRF8 634 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 ABHD10Q9NUJ1 306 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 CEP72Q9P209 647 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 ABCB11O95342 1321 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 PALM3A6NDB9 673 aaPredicted RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 USP17L10C9JJH3 530 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 INO80B-WBP1J3KQ70 363 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 EIF2AK2P19525 551 aaKnown RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 PRELPP51888 382 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 CTAGE3PQ8IX95 158 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 PROCA1Q8NCQ7 364 aaPredicted RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 RSRC1Q96IZ7 334 aaKnown RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 INO80BQ9C086 356 aaPredicted RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 RABEP2Q9H5N1 569 aa13.72□□□□□ -0.21
CLTC-202ENST00000393043 TDRD3Q9H7E2 651 aaKnown RBP13.72□□□□□ -0.21
CLTC-202ENST00000393043 CAPN9O14815 690 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 PSMC4P43686 418 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 VPS41P49754 854 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 CACNB3P54284 484 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 TXNRD1Q16881 649 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 NAA35Q5VZE5 725 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 DPP9Q86TI2 863 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 CACNA2D3Q8IZS8 1091 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 GPATCH11Q8N954 259 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 CRAMP1Q96RY5 1269 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 MED10Q9BTT4 135 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 VWDEQ8N2E2 1590 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 TROVE2P10155 538 aaKnown RBP eCLIP13.71□□□□□ -0.212e-13■□□□□ 10.7
CLTC-202ENST00000393043 PPM1FP49593 454 aaPredicted RBP13.71□□□□□ -0.21
CLTC-202ENST00000393043 IGBP1P78318 339 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 SLFN12LQ6IEE8 588 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 CCT6BQ92526 530 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 TBC1D22BQ9NU19 505 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 PIM2Q9P1W9 311 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 CD2APQ9Y5K6 639 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 JCADQ9P266 1359 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 USP11P51784 963 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 NEDD9Q14511 834 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 VPS72Q15906 364 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 GPR162Q16538 588 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 RINT1Q6NUQ1 792 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 ANKRD42Q8N9B4 389 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 NACA2Q9H009 215 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 EPB41L5Q9HCM4 733 aa13.71□□□□□ -0.21
CLTC-202ENST00000393043 RASSF2P50749 326 aa13.71□□□□□ -0.22
CLTC-202ENST00000393043 CYP27A1Q02318 531 aa13.71□□□□□ -0.22
CLTC-202ENST00000393043 ANKRD20A3Q5VUR7 823 aa13.71□□□□□ -0.22
CLTC-202ENST00000393043 ALKBH5Q6P6C2 394 aaKnown RBP13.71□□□□□ -0.22
CLTC-202ENST00000393043 CCDC13Q8IYE1 715 aa13.71□□□□□ -0.22
CLTC-202ENST00000393043 CPVLQ9H3G5 476 aa13.71□□□□□ -0.22
CLTC-202ENST00000393043 FAM170AA1A519 330 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 IREB2P48200 963 aaKnown RBP13.7□□□□□ -0.22
CLTC-202ENST00000393043 MTERF2Q49AM1 385 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 PDXDC2PQ6P474 469 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 DHX40Q8IX18 779 aaKnown RBP13.7□□□□□ -0.22
CLTC-202ENST00000393043 GUF1Q8N442 669 aaKnown RBP13.7□□□□□ -0.22
CLTC-202ENST00000393043 SMC1BQ8NDV3 1235 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 MCUR1Q96AQ8 359 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 PARD6BQ9BYG5 372 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 FBXO2Q9UK22 296 aaPredicted RBP13.7□□□□□ -0.22
CLTC-202ENST00000393043 SPATA31A1Q5TZJ5 1347 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L15C9J2P7 530 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L13C9JLJ4 530 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L11C9JVI0 530 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L18D6R9N7 530 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L22D6RA61 530 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L17D6RBQ6 530 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L19D6RCP7 530 aa13.7□□□□□ -0.22
CLTC-202ENST00000393043 USP17L20D6RJB6 530 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms