RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 CCT8L2Q96SF2 557 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 OSBPL9Q96SU4 736 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 SLC39A2Q9NP94 309 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 RIC8AQ9NPQ8 531 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 ZNF233A6NK53 670 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L15C9J2P7 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L13C9JLJ4 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L11C9JVI0 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L18D6R9N7 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L22D6RA61 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L17D6RBQ6 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L19D6RCP7 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L20D6RJB6 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 ZBTB5O15062 677 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 ECE2O60344 883 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 TRIM21P19474 475 aaKnown RBP16.53■□□□□ 0.24
SHTN1-204ENST00000392903 GUCY1A3Q02108 690 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L24Q0WX57 530 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 NLRP14Q86W24 1093 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 MYCBPAPQ8TBZ2 947 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 MIEF2Q96C03 454 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 CDK5RAP3Q96JB5 506 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 DUSP9Q99956 384 aaKnown RBP16.53■□□□□ 0.24
SHTN1-204ENST00000392903 C7orf25Q9BPX7 421 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 PSTPIP2Q9H939 334 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 FAM198AQ9UFP1 575 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 HYOU1Q9Y4L1 999 aa16.53■□□□□ 0.24
SHTN1-204ENST00000392903 MYH10P35580 1976 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 H0YIN7 160 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 USO1O60763 962 aaKnown RBP16.52■□□□□ 0.24
SHTN1-204ENST00000392903 FAM107AO95990 144 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 NR1D1P20393 614 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 NF2P35240 595 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 SNAP25P60880 206 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 AMPD3Q01432 767 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 CYP27A1Q02318 531 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 CERKLQ49MI3 558 aaPredicted RBP16.52■□□□□ 0.24
SHTN1-204ENST00000392903 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.24
SHTN1-204ENST00000392903 CFAP58Q5T655 872 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 RNF187Q5TA31 235 aaPredicted RBP16.52■□□□□ 0.24
SHTN1-204ENST00000392903 EP400NLQ6ZTU2 488 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 SV2BQ7L1I2 683 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 SH3BP5LQ7L8J4 393 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 MREGQ8N565 214 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 CUL5Q93034 780 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 PNMA5Q96PV4 448 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 SH2D4AQ9H788 454 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 BLOC1S4Q9NUP1 217 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 MAGEC2Q9UBF1 373 aaPredicted RBP16.52■□□□□ 0.24
SHTN1-204ENST00000392903 CAPN6Q9Y6Q1 641 aa16.52■□□□□ 0.24
SHTN1-204ENST00000392903 RASSF10A6NK89 507 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 B4DLN1 442 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 ZNF263O14978 683 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.23
SHTN1-204ENST00000392903 MARCH6O60337 910 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 TMEM266Q2M3C6 531 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 C8orf74Q6P047 294 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 P2RX5Q93086 422 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC47Q96A33 483 aaKnown RBP16.51■□□□□ 0.23
SHTN1-204ENST00000392903 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 SLC40A1Q9NP59 571 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 SCN9AQ15858 1988 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC189A1A4V9 331 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 MYMKA6NI61 221 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 GDF11O95390 407 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 MDH1P40925 334 aaKnown RBP16.51■□□□□ 0.23
SHTN1-204ENST00000392903 SLC1A4P43007 532 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 MRPL12P52815 198 aaKnown RBP16.51■□□□□ 0.23
SHTN1-204ENST00000392903 SEPT2Q15019 361 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 SPA17Q15506 151 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 AOC3Q16853 763 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 DACT2Q5SW24 774 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 CEP85LQ5SZL2 805 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 KIAA0895Q8NCT3 520 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 SNX29Q8TEQ0 813 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 DHTKD1Q96HY7 919 aaPredicted RBP16.51■□□□□ 0.23
SHTN1-204ENST00000392903 ACTR5Q9H9F9 607 aaPredicted RBP16.51■□□□□ 0.23
SHTN1-204ENST00000392903 MAGEF1Q9HAY2 307 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 PI4KBQ9UBF8 816 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 DDX25Q9UHL0 483 aaKnown RBP16.51■□□□□ 0.23
SHTN1-204ENST00000392903 ODF2LQ9ULJ1 636 aa16.51■□□□□ 0.23
SHTN1-204ENST00000392903 NRXN2Q9P2S2 1712 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 A0A1W2PQJ5 194 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 MATR3P43243 847 aaKnown RBP eCLIP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.236e-6■■■■□ 25.8
SHTN1-204ENST00000392903 CCDC181Q5TID7 509 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 STRIP1Q5VSL9 837 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 KCNK18Q7Z418 384 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 IFT20Q8IY31 132 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 MAGEC3Q8TD91 643 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 NOC3LQ8WTT2 800 aaKnown RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 LARP4BQ92615 738 aaKnown RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 N4BP2L2Q92802 583 aaPredicted RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC17Q96LX7 622 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 CCDC43Q96MW1 224 aaKnown RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 TUBGCP2Q9BSJ2 902 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
SHTN1-204ENST00000392903 GDF3Q9NR23 364 aa16.5■□□□□ 0.23
SHTN1-204ENST00000392903 QSER1Q2KHR3 1735 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms