RNA–Protein interactions for RNA: ENST00000392556.8

TRAF3IP2-208, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,188 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-208ENST00000392556 TOP1P11387 765 aaKnown RBP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CDK7P50613 346 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 AK2P54819 239 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TBC1D8BQ0IIM8 1120 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GNL2Q13823 731 aaKnown RBP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 CCDC178Q5BJE1 867 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 IQSEC1Q6DN90 963 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 C11orf57Q6ZUT1 292 aaPredicted RBP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FGD4Q96M96 766 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MPHOSPH6Q99547 160 aaKnown RBP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SH2B1Q9NRF2 756 aaPredicted RBP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ADD3Q9UEY8 706 aaKnown RBP12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ZNF536O15090 1300 aa12.72□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ARVCFO00192 962 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 DLL1O00548 723 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FANCGO15287 622 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SHOX2O60902 331 aaPredicted RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TUBBP07437 444 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 C6orf222P0C671 652 aaPredicted RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RDXP35241 583 aaKnown RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FAAP100Q0VG06 881 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FBXW10Q5XX13 1052 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SH3RF1Q7Z6J0 888 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MSANTD4Q8NCY6 345 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 BICD2Q8TD16 824 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MORC4Q8TE76 937 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 SH3GL3Q99963 347 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 KATNBL1Q9H079 304 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RNF41Q9H4P4 317 aaPredicted RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 VTA1Q9NP79 307 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 IL17RBQ9NRM6 502 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TBX21Q9UL17 535 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 FAM169AQ9Y6X4 670 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GOLGA6L9A6NEM1 432 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ZSCAN12O43309 604 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RANBP6O60518 1105 aaKnown RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 ASGR1P07306 291 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 PAX7P23759 505 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 TNFAIP2Q03169 654 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 MFSD5Q6N075 450 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 N4BP2L2Q92802 583 aaPredicted RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RNPC3Q96LT9 517 aaKnown RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 AP5M1Q9H0R1 490 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 GBP3Q9H0R5 595 aa12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 RANBP17Q9H2T7 1088 aaKnown RBP12.71□□□□□ -0.37
TRAF3IP2-208ENST00000392556 B4DLN1 442 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 EBAG9O00559 213 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FOXP2O15409 715 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 NR1I2O75469 434 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 IPO7O95373 1038 aaKnown RBP12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 MCM6Q14566 821 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 GNASQ5JWF2 1037 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 C9orf50Q5SZB4 431 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 AP1ARQ63HQ0 302 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TTC19Q6DKK2 380 aaPredicted RBP12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TMEM199Q8N511 208 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 GUCD1Q96NT3 240 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ANO10Q9NW15 660 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 N4BP1O75113 896 aaKnown RBP12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ALAS1P13196 640 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CTDSPL2Q05D32 466 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CCDC96Q2M329 555 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 AFAP1L1Q8TED9 768 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 LEO1Q8WVC0 666 aaPredicted RBP12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SPATA32Q96LK8 384 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 AGBL1Q96MI9 1066 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SEMA6BQ9H3T3 888 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 VIPAS39Q9H9C1 493 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 HOMER2Q9NSB8 354 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CYP39A1Q9NYL5 469 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CCPG1Q9ULG6 757 aa12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 GNEQ9Y223 722 aaKnown RBP12.7□□□□□ -0.38
TRAF3IP2-208ENST00000392556 HIP1O00291 1037 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FSBPO95073 299 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FGAP02671 866 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PDCP20941 246 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FNTAP49354 379 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 AARSP49588 968 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 PSRC1Q6PGN9 363 aaPredicted RBP12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 KCTD1Q719H9 257 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ARMC2Q8NEN0 867 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 ZNF483Q8TF39 744 aaPredicted RBP12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 VTI1AQ96AJ9 217 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 MTIF3Q9H2K0 278 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 FAM204AQ9H8W3 233 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SMCHD1A6NHR9 2005 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 WDR19Q8NEZ3 1342 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SOWAHBA6NEL2 793 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 HSPD1P10809 573 aaKnown RBP12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 RWDD2BP57060 319 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 CNTN2Q02246 1040 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 TRAF1Q13077 416 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 SYDE2Q5VT97 1194 aa12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 LENG1Q96BZ8 264 aaPredicted RBP12.69□□□□□ -0.38
TRAF3IP2-208ENST00000392556 NAT10Q9H0A0 1025 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms